Cyprinodon variegatus (sheepshead minnow): 107098225
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Entry
107098225 CDS
T06110
Symbol
slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107098225 (slc6a4)
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107098225 (slc6a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107098225
NCBI-ProteinID:
XP_015251240
Ensembl:
ENSCVAG00000014681
UniProt:
A0A3Q2E6L4
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MEAKDMMMTNVSTTEEGETRGERGEGRVEVEGKEEETQEENVNLVLADGLGNKGPKSLTS
DSGQQVSNGYTTSTPQSPREGSAQRTAAGAATTPTGGTGLAGPLGGLRTLVVQQTSLERP
RETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELA
LGQFHSSGCISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRPTLPWT
TCTNSWNTANCNRYLSSDQNVSWSNSSTSPAEEFYTRHVLQVHLSPGLHQLGSISWQLAL
CLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLVLLIRGATLPGAWRGVVFYLKPDW
EKLLSTTVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALVTSSVNCLTSFLSGF
VIFTVLGYMAEMRKQNVDDVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLD
STFAGLEGVITAMLDEFPHLLAKRREWFVFGLVCVCYLGALSTLTYGGAFVVKLFEEYAT
GPAVITVVLLEVIAVSWFYGTNRFCNDIQLMLGFYPGGFWRICWVAICPCFLLFIIISFL
AFPPEVKLFHYQYPPWTTALGYCIGVSSFICVPAYMVYHLLNAKGTFKQRLLKSITPQPS
SNSHRDLFVTNAI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaaagatatgatgatgacgaacgtgtcaacaacagaagagggggagaccagg
ggagaaaggggggaagggagagtggaagtagaggggaaagaggaggagacccaagaggaa
aatgttaacttggttctggctgatggtcttggaaacaaaggaccaaaaagcctgacctct
gactccggtcagcaggtttctaacggctacacaacatccacccctcagagccccagggag
gggtcggcacagagaacagccgcaggggcggctaccacgcctacggggggaaccgggtta
gccgggccgctgggaggtctgagaactctggtggtccagcagaccagcttagagaggccc
agagagacctggagcaagaagatggacttcctgttgtctgtgatcggctatgcggtggat
ctcggaaacgtctggaggttcccgtacatctgctaccagaatggaggaggtgcctttctg
ctgccctacctgttgatggctgtgtttggaggagtccctctgttctacatggagctcgct
ctgggccagttccacagcagcggctgcatctccatctggaagcacatctgccccatcttc
aaaggaatcggctttgccatctgcatcatcgccctttacatcgccttctactacaacacc
atcatggcctgggcgctctactacctgctgtcctctttccgacccaccctgccctggacc
acctgcaccaacagctggaacacggcgaactgcaaccgctacttgtcgtcggaccagaac
gtgtcctggtccaactcgtccacgtcccccgccgaggagttctatacgcgccacgtgctt
caggtccacctttccccaggtctgcaccagctgggatccatcagctggcagctggccctc
tgtttgctcttcatcttcaccatcgtctacttcagcatctggaagggagtgaagacgtct
ggaaaggtggtatgggtgacagcgacatttccttacctggtcctcctggtccttctcatc
cgaggggccacactgccaggggcctggaggggcgtggtcttttatctcaagcctgattgg
gagaaactgcttagcactacggtttggatcgacgcagcagctcagatcttcttctccttg
ggtcctgggttcggtgtgctgctcgccttcgccagctacaacccctttcacaacaactgc
tataaagatgcgctggtcaccagctcagtgaactgcctgaccagcttcctgtctggtttc
gtcatctttaccgtgctgggctacatggcagagatgagaaagcaaaatgtggacgacgtg
gcgaaggatgcgggtcccagtctgttgttcatcatctacgctgaggccatcgccaacatg
cccgccgccaccttctttgccatcatcttcttcctgatgatcataatgctgggtctggat
agcacgtttgcaggtttggagggggtaatcacagcaatgctggatgagttccctcacctc
ctagctaagagacgcgagtggtttgtctttggccttgtctgtgtgtgctacctcggggct
ctgtccactctcacatatggaggagcatttgtggtgaagctgtttgaagagtacgctacg
ggccccgctgtcatcaccgtggttttgctggaggtcatcgccgtgtcctggttctacggt
accaaccgtttctgcaacgacatccagctcatgctgggtttctatccgggtgggttctgg
aggatctgctgggtggccatctgtccctgtttccttctgtttatcattatcagtttcctg
gcgttccctccagaggtgaagctgttccactaccaatacccaccatggacaactgccctg
ggttactgcatcggcgtgtcctcattcatctgtgtgcctgcttatatggtctaccactta
ctgaatgctaagggtacattcaagcagcgcctgttgaaaagcatcactccccagcccagc
agcaacagccacagagatttatttgtgaccaacgcaatctga
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