Cyprinodon variegatus (sheepshead minnow): 107100031
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Entry
107100031 CDS
T06110
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00780
Biotin metabolism
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
107100031 (hlcs)
Enzymes [BR:
cvg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
107100031 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
107100031 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
107100031 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
107100031 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
Motif
Other DBs
NCBI-GeneID:
107100031
NCBI-ProteinID:
XP_015253856
Ensembl:
ENSCVAG00000012035
UniProt:
A0A3Q2CW05
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MLITLCYVYMWVLFHKCYSVLIRNSLSRLRSRKSRLCLSFCSGSGSASTSCTAPPPGLSG
AAPNSHNLTGPGDNVFLQLGDKAVYVTEPQACDDLSQWTVLTSSLIDAPWIDNISFIIEA
AESKVGFASPATNKQVLKWSDYCFPLALSPGQPFRAVAQTTEENFTRLGVAFIEDRLQLD
SGLVPSKIVPVLLQDGPLTKALDRRCLQIPHLLLSSLPKHFVSGSFSQLLPADQQNPQCR
KGSLLIAPEVKRKLEERRGSEPLPSSQIVHQEYHHHHMEGHGHPLHLSSCHECLELENST
ILSVKYASAENIPDLPDDHSVGPDSVEGCFSELEHDFKVSSGQSGGCSTAPNVLVYTGGC
QERFQAIRKLLSDCINVENNIIYPLLQEQALNDPWLDNTRLLVLAEEEPLTPELQTRFLT
YLCNGGKVLGLGSTLCPAGLHLEVREGQSLQRRRLIFTREDSTELEATILTSGKVYIRDP
REGGEVELWGELKGDVPHPREMVIVRLTHGADGGEAVLCQVYFDIASHSNNLNSSDFDEL
KVSNELRYKILTEILNSLGVNCEARPTPAPGPVYLLATSQERKASFLKVLQKRADEDGII
RFSKASFRMVASTDPCEGPVVPEDCLSLITESEDTKQFMETYCKHLRTKELGNTVLYAEV
ATSTMDLLEGLLLHLPKDVGMISVASQQTQGKGRGRNAWLSPLGCAMFTVGVRVELDSRL
GQRIPFLQHLAALAVVEAVCTLPGYQDINLRVKWPNDIYYSNLMKLGGVLVTSTVVGSTF
HLLIGCGFNVTNSNPTVCINDLIHQYNRQNHCSLEPLSCSQLIALTLNCLEDLIHSFQHK
GPDAVLPTYYKRWLHSGTLVRLWSEEGPEAQVVGLDDNGFLQVYNKEEGVISVEPDGNSF
DMLKNLVVRKRN
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgttaataactctgtgttacgtctacatgtgggtcctttttcacaagtgttactcggtg
ttgatccgcaacagtctgtcgaggctgaggagcaggaagagccgcctctgcctcagcttc
tgttccggctccggttcggcttctacatcctgcacagcaccgcccccaggactcagcgga
gccgctccaaattcacacaaccttaccggtcccggagacaatgttttcctccagctcgga
gacaaggccgtctatgtcacggagcctcaggcgtgtgatgacctcagccaatggaccgtt
ctcacatcctctctgattgatgctccttggatcgataacatctccttcataatagaagct
gctgagagcaaagtgggatttgcttctcctgcaacaaataagcaagtgctgaagtggtct
gactactgtttcccgttggccctcagccctggccagccattcagagcggtggcccagacc
actgaggagaacttcactcgtctcggggttgcattcatcgaagatcgccttcagctggac
agtggactggtgccttccaagatagtcccagtccttctccaagacggtcctttaaccaaa
gcgttggaccgacggtgtctgcagatcccccacctgctcctctcctctcttccgaaacac
tttgtctctggctccttctctcagctgctgccagccgaccagcagaacccacagtgccga
aaaggtagtcttcttattgccccagaggtaaagaggaagttagaggagcgtcgggggtcg
gagcctctacccagctctcagattgtccatcaggaataccatcatcaccacatggagggc
catggacacccacttcatctctccagctgccatgaatgtttagaactggagaacagcacc
atcctctccgtcaaatatgcctcagctgagaacattccagatctaccagatgatcattcg
gtaggaccggacagtgtagaagggtgttttagcgaacttgaacatgacttcaaggtttct
tctgggcaaagtggtggatgttcaacagcccctaatgttctcgtgtacacgggtggatgc
caggaacgctttcaagccattcgtaagctattgtcagactgcataaatgtagaaaacaat
ataatataccccctcctgcaggaacaggcactaaatgacccatggctggacaataccaga
ctcctagttctggcagaagaggaacccttgacccctgagcttcagacccgctttctcaca
tacttatgcaacggtggaaaggtactggggctgggctccactttgtgcccggcgggtctc
catctggaggtcagggaaggacaatccttgcagcgccgaaggttgattttcaccagagag
gatagcacagagctggaagcaaccattttaacaagtggaaaggtctacattagagacccc
cgggagggaggagaagtggagctttggggggagctgaaaggtgacgtccctcatccgaga
gaaatggttatagttcggctaacgcatggagcagacggcggggaagctgtcctctgtcag
gtttattttgacattgcatcacactcaaacaacctcaattcaagtgattttgatgagctg
aaggtcagcaatgagctgcgctataaaatcctgactgagatcctgaactctttgggtgtg
aactgtgaagcgcgcccgactcctgccccaggtcctgtctacctgttggccacctctcag
gagcgcaaagcaagtttcttgaaggtgctacaaaagcgggcagatgaagacgggatcatt
cgattctccaaagcctccttcagaatggtggcgagcaccgacccatgtgaaggtcctgtg
gtgcccgaggactgcctgtctttgatcacggaatccgaggacaccaaacagtttatggag
acctactgcaaacatctgaggaccaaagagctgggaaacacagtgctctacgctgaggtc
gccacttccaccatggacctacttgaagggctgctgctccacttgccaaaggatgttggt
atgatatcagttgcttctcagcaaacacagggaaaaggccgaggcagaaatgcctggctc
agcccactgggctgtgccatgttcactgttggggtccgagttgagctggactccaggctc
ggtcaaaggattcctttcctgcaacatctggctgctttagctgttgtggaagccgtttgc
acacttcctggatatcaggacatcaacctgagagtaaaatggcccaacgacatctactac
agtaacctgatgaagctcgggggggttttggtcacatccaccgtcgtaggatcaactttt
catctgcttataggatgtggctttaatgtgacgaacagcaacccaacagtgtgcattaat
gacctgatccatcagtacaacaggcagaaccactgcagtctggagcctctcagctgctcc
cagctcatcgctctcactctgaactgtctggaagatctcatccacagttttcagcacaaa
ggaccagatgctgttctgcccacctactataaaagatggcttcacagtgggactctggta
cgtctgtggagcgaggagggaccagaagctcaggtggtaggcctcgatgataacggcttc
ctgcaggtgtacaataaagaggaaggcgtcatctctgtggagcctgatgggaactcattt
gacatgttgaagaacctggtggtgaggaagcggaactag
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