Cyprinodon variegatus (sheepshead minnow): 107100387
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Entry
107100387 CDS
T06110
Name
(RefSeq) transcription factor E3-like
KO
K09105
transcription factor E3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107100387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107100387
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
107100387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
107100387
NCBI-ProteinID:
XP_015254335
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MSSRVLLRQQLMREQAQEQERREAQQQASASQLRASVPTTAISVTLPPNAARPPPAQVPV
EVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTLGNKAITQSLGVSPVHQSSSAPEVGPSA
SSAPNSPMALLNIGSNKEEIDDVIDDIISLESSFNDDIITMIDSGLQLPSTLPGTLLDVY
NSPGMAGPALTVSNSCPADLPQIKREITDADTKALLKERQKKDNHNLIERRRRFNINDRI
KELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKEQQRAKDIEMRQKKLEQANHILMLR
IQELEMQARLHGIQASNNISSGLTSDVSLQHQPEAPHSGQSLPTNTAVASSLNLSGLGGA
AQPLPASFLSPPSSDSPAGVTISSPLDLGSLSFAELDDPTASALYPDVGLGDILMDDGCT
LSPDRMGGPLFSPLSPGASKTSSRRSSLEMDEDL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgcgttttgctgcgccagcagctgatgcgagaacaagcccaggagcaggaa
agacgtgaggcccagcagcaggcctctgcctcccagctccgggcctctgtccccacgaca
gccatctctgtcactttgcctcccaatgctgctcgtcctccaccagcacaggtgcctgtg
gaggtgctaaaagtccagacccacttggagaatcctactaagtaccacatccaacaggca
cagaggcaacaagtcaagcagtatctctccaccactctgggaaacaaggcgatcactcag
tctctcggcgtttcccctgtgcaccagtctagctcggcccctgaagtcggcccctctgcc
agcagcgcccccaacagtcctatggctctacttaacatcggatccaacaaggaggaaatt
gatgacgtgatcgacgacatcatcagtctggaatccagcttcaatgacgacattattaca
atgatcgattcaggtctccagctgcccagcacgctcccgggaactctgctggatgtttac
aacagccctggaatggcaggtcctgctctcactgttagcaactcctgccctgctgacctg
ccacagattaaaagggaaattactgatgccgataccaaagcattattgaaagaaaggcaa
aagaaagacaaccataacctcattgagcggaggcgacgattcaacataaatgatcgaatt
aaagagctgggtactctgatccccaaatcaagtgacccagagatgcgctggaataaaggc
accattctcaaagcctctgtagactacatcaggaaactacagaaggaacaacagagagcc
aaggatattgaaatgcgccaaaagaagttggagcaggccaaccacattctaatgttgcgc
attcaggagctagaaatgcaggcacggctccacggaatccaagcatccaacaatatttcc
tcaggcctgacttccgacgtctcgctgcagcatcagccagaagctccccacagtggccag
tcactgcccacaaacacagcagtggcctcctccctgaacctttccgggctgggaggcgca
gcgcagccgctgccggcctccttcctttccccgccctcctcagactcccccgccggggtc
accatcagcagcccgctggacctcggcagcctgagcttcgccgagctggacgaccccacc
gcctcagcactgtaccccgacgtcggcctgggggacatcctcatggatgacgggtgcacc
ctgtcgccagacaggatgggcgggccgctgttttcacctctgtcaccaggtgcctctaaa
accagcagccgcaggagcagccttgaaatggacgaggacttgtga
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