KEGG   Crassostrea virginica (eastern oyster): 111103789
Entry
111103789         CDS       T09197                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cvn  Crassostrea virginica (eastern oyster)
Pathway
cvn03020  RNA polymerase
cvn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111103789
  09124 Replication and repair
   03420 Nucleotide excision repair
    111103789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvn03021]
    111103789
   03400 DNA repair and recombination proteins [BR:cvn03400]
    111103789
Transcription machinery [BR:cvn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111103789
  RNA polymerase III system
   RNA polymerase III
     111103789
  RNA polymerase I system
   RNA polymerase I
     111103789
DNA repair and recombination proteins [BR:cvn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111103789
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 111103789
NCBI-ProteinID: XP_022292968
EnsemblRapid: LOC111103789
UniProt: A0A8B8AQP7
LinkDB
Position
7:complement(51960239..51963701)
AA seq 128 aa
MADDEHDVDNFDDDIDDDDEPLDEAVETQEDGEPIDILPADQANQPVAAQKRITTPYMTK
YERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKARKIPIIIRRFLPDGSFEDWG
IDELQMTE
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcggatgatgaacacgatgtcgataattttgatgatgacattgacgatgatgatgaa
ccgttagatgaggctgtggaaactcaagaggatggtgaaccaattgacattctcccagct
gaccaagccaatcaaccagtggcagctcaaaaacgaatcacaacgccctacatgaccaaa
tacgaacgggcacgcgtcctaggaacaagagctctacagattgctatgtgtgcaccagtc
atggttgaattagaaggagaaacggaccctctacagattgccatgaaggaactcaaagca
cgaaaaattcccataattatccgtcgattcttgccggatggaagctttgaggactgggga
atcgacgagcttcagatgaccgagtga

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