Crassostrea virginica (eastern oyster): 111113388
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Entry
111113388 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: beta-galactosidase-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00052
Galactose metabolism
cvn00511
Other glycan degradation
cvn00531
Glycosaminoglycan degradation
cvn00600
Sphingolipid metabolism
cvn00604
Glycosphingolipid biosynthesis - ganglio series
cvn01100
Metabolic pathways
cvn04142
Lysosome
Module
cvn_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
111113388
09103 Lipid metabolism
00600 Sphingolipid metabolism
111113388
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
111113388
00604 Glycosphingolipid biosynthesis - ganglio series
111113388
00511 Other glycan degradation
111113388
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111113388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111113388
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
111113388
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111113388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
111113388
NCBI-ProteinID:
XP_022307342
EnsemblRapid:
LOC111113388
UniProt:
A0A8B8BVE9
LinkDB
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Position
9:complement(70385859..70400672)
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AA seq
663 aa
AA seq
DB search
MTGKMAAMRWRWIFLCCGFVYFLSACCLSQAQNRTFEIDYLGNTFVKDGKPFRYVSGSIH
YMRVPKEYWRDRLEKMYAAGLDAIQFYIPWNYHEPEEGQYDFEGQRDFVQFIKQAQEVGL
LVLLRAGPYICGEWDFGGFPAWLLKDNPNIQLRKMDPTYIKYVDIWMDKLLPMITPLMYE
NGGPVLMVQIENEYGSYYTCDHDYMAHLRDKAREHLGSRXLLYTTDGSGDGFLKCGTVAG
AYVTVDFGTSFNPQKSFQPQRDYEPFGPLVNSEFYPGWLDHWGYPHSTVNLDVFSKALDM
LLDYGANVNMYMFEGGTNFGFWNGANYXPFQAVPTSYDYDAPMTEAGDITDKYIAIRQVI
SKYKQLPSMPIPKNTTKVAYGKVEMSFMATIQDALPTLCPGGPIKSEYPLTMEAIGQYQG
FVLYRHTLLGDTPSEPKTLDLSGVRDRXYLMINQVPQGVFDRNGQKTLNLTLKVNQTIDI
LVENMGHIGFGSEMNNNSKGLISNVTFGGSMLTGWVIYPLKVENFKPTSLTGIYRDKPFT
NGNLTTPSFYVGKLHIPKDPEDTYLDMSSWGKGQHMIMSSTMNNVGRYWXYVGPQVRLYI
PKPFLAPSPTINYVIMFELEKPPCDTADKCYVEFVDQALINATPHRPNFQREETEFSRKR
ISS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaaaatggctgccatgagatggaggtggattttcctctgctgtggatttgtt
tattttctatcagcgtgttgtttatcacaggcacaaaacaggacgtttgagattgactac
ctagggaacaccttcgtgaaggatggcaaaccattccgctatgtgtcggggagcattcat
tacatgagagttcctaaagaatactggagagaccgcctcgagaagatgtatgctgcagga
ttggatgccattcagttctacatcccctggaattaccatgagcctgaggaaggccagtat
gactttgagggccagagagactttgttcagttcatcaagcaagcacaggaagtgggttta
ctggttctcctacgggctgggccctacatctgcggagaatgggatttcgggggattccca
gcctggctactgaaggacaaccccaacatccagctcagaaaaatggatccaacatatatc
aaatatgtggacatttggatggacaagttattgcccatgatcacccccctgatgtatgaa
aatggaggcccggtcctgatggtgcagattgagaatgaatacggcagttattacacgtgt
gaccatgactacatggctcacctgcgggataaagcccgggaacacctggggtcccggncg
ttactttacaccacggacgggagtggggacggattcctaaaatgtggcacggtggccggg
gcgtatgtcaccgtggatttcggaacctccttcaatccacagaagtcgtttcagcctcag
agggattacgagccctttgggcctctggtgaattcggagttttaccctgggtggctggac
cactgggggtacccccactccacagtcaatctggatgtcttctccaaagcactggacatg
ctgctggactacggcgccaacgtcaacatgtacatgtttgagggagggacaaactttgga
ttttggaatggagccaactatngcccattccaggctgttccaactagttatgattatgat
gcacccatgactgaggcaggggacataactgataaatacattgccatcagacaggtcata
tcaaagtataaacagcttccaagcatgcccattcccaaaaataccactaaagtagcttat
ggaaaagtggaaatgagctttatggccaccattcaagatgcacttccaactctgtgtccc
ggtggaccaatcaaatcggagtatccacttacaatggaggccattggccagtaccagggt
tttgttctgtaccgacacacactgttaggggacaccccgtctgaacccaagaccctggat
ctgtcgggggtcagggaccggncctacctgatgattaaccaggtaccacagggtgtgttt
gatcgtaatggacagaagacgctgaacctgaccctaaaggtcaatcagacgatcgacatt
ctggtggagaacatgggccatattggattcggctcagagatgaacaacaattctaagggc
ttgatcagtaatgtgacgtttggaggctccatgttgactgggtgggtcatctatccactg
aaggtagagaacttcaagccaacaagtcttacagggatatatagggataaacccttcaca
aatggcaatttgaccacaccctctttctacgtgggtaagcttcacatccctaaggaccct
gaagatacctaccttgatatgagcagctggggaaagggacagcatatgatcatgtcgtcc
accatgaacaatgtgggtcgttactggncctacgtagggcctcaggtccgtctctatatc
cccaaaccattcctggctccctcccctaccatcaactatgtcatcatgttcgagctcgag
aaaccgccctgtgatacagccgacaaatgctacgtggagtttgtggatcaagctctgatt
aatgctacaccacacagacctaattttcaacgagaagagactgaattttccagaaagcga
atatcctcatga
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