Crassostrea virginica (eastern oyster): 111115897
Help
Entry
111115897 CDS
T09197
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00512
Mucin type O-glycan biosynthesis
cvn01100
Metabolic pathways
Module
cvn_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
111115897
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvn01003
]
111115897
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
111115897
Glycosyltransferases [BR:
cvn01003
]
Glycan extension
O-Glycan
111115897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
111115897
NCBI-ProteinID:
XP_022310513
EnsemblRapid:
LOC111115897
UniProt:
A0A8B8C6N4
LinkDB
All DBs
Position
1:21365713..21373991
Genome browser
AA seq
445 aa
AA seq
DB search
MVQRRFTTFFISSSFSIILIFTIHNIVWRNPHSIVGSFNKEADLNLQSVRRRLVHDVDCP
RIIEGDDTEIFFAAELMKRKEFNFITDDELRELAQNCEMFFKTFDYNRFIVSQEELDFPI
AFSLIVHKNAVQIERLLRAIYRPHNVYCIHIDRKADSSLHDAIAAVIKCLPNVFIASKLE
NVIYAGYSRLQADINCMYDLLHYSSVKWKYFINLPAQEYPLKTNAEIVKILKLLNGTCSI
ESKYDKVFHYRVTQSYWENPKTLNVERRYLRKSPPPHNMTVGKGSAYGAFSRRFVEFALN
DERAQDLLKWTEDTYSPDETFWATLAINKHLGTPGIKYTASGVPNRRVWMTTNVAWGYRG
NPGCFGQYVREVCVYGVGDLQRLVTEREFFANKFYHDFQPYALMCLEEWLFNKSATTLPF
ELYYYKKLINPTRYMIRVNLKKRLN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggttcagagaagatttaccacctttttcatttcatcttcattttccataatattgata
ttcacaatccacaacattgtttggcggaatccccacagtatcgtaggaagttttaacaaa
gaggcagatctgaatttacagtcagttcgtcggagattagtgcacgatgttgactgtcca
agaattattgaaggtgacgacacggagatattctttgctgcagagttaatgaaacgtaag
gaattcaatttcataacggacgacgaattacgagaactggcccaaaactgtgaaatgttt
ttcaaaacatttgactataatagattcatagtatcacaagaggaattggacttccccata
gctttttcgttgatagtacacaaaaatgctgttcaaattgaaaggttattaagggctatt
tatcgtccacataatgtttactgcattcatatcgataggaaagcagattcctctttgcac
gatgccattgcagcagttataaagtgtcttcctaatgtcttcattgcatcaaaactggaa
aatgtcatctacgcgggttattcccgacttcaggcagacattaattgcatgtatgatctt
ctgcattactcgagtgtaaaatggaaatattttattaatttgccagcgcaagagtatccg
ttgaaaacaaacgctgaaattgtaaaaatattaaaactattgaacggaacatgcagcatt
gagagcaagtatgacaaagtttttcattatcgtgtgacgcaatcgtattgggaaaaccca
aagacattgaacgttgaacgtagatacttaagaaaatctccaccacctcataacatgact
gtgggcaagggaagtgcgtacggtgccttcagtagacgttttgtggaatttgcactgaac
gacgagagagcacaagacttgttgaagtggacagaggatacatatagtccggatgaaact
ttctgggctaccctggcaattaacaagcacttgggaactccaggaatcaagtacacagca
tcgggagtcccgaacaggagggtgtggatgacgaccaatgtagcgtggggttatcgagga
aatccgggctgtttcggccaatacgtccgggaggtttgtgtctacggagtcggggattta
caaaggcttgtaacagaaagagagtttttcgccaacaagttctaccatgacttccagccc
tacgctctcatgtgcctggaagagtggctattcaataaaagcgcaacaactttgcccttt
gaactctactactataaaaaattgataaatcctacacgatatatgatacgtgtaaattta
aaaaaaaggttaaattaa
DBGET
integrated database retrieval system
