Crassostrea virginica (eastern oyster): 111117796
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Entry
111117796 CDS
T09197
Name
(RefSeq) beta-1,4-N-acetylgalactosaminyltransferase bre-4-like
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00510
N-Glycan biosynthesis
cvn00513
Various types of N-glycan biosynthesis
cvn00514
Other types of O-glycan biosynthesis
cvn00515
Mannose type O-glycan biosynthesis
cvn00533
Glycosaminoglycan biosynthesis - keratan sulfate
cvn00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cvn01100
Metabolic pathways
Module
cvn_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
111117796
00513 Various types of N-glycan biosynthesis
111117796
00515 Mannose type O-glycan biosynthesis
111117796
00514 Other types of O-glycan biosynthesis
111117796
00533 Glycosaminoglycan biosynthesis - keratan sulfate
111117796
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111117796
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvn01003
]
111117796
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
111117796
2.4.1.90 N-acetyllactosamine synthase
111117796
Glycosyltransferases [BR:
cvn01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111117796
Glycolipid
111117796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
111117796
NCBI-ProteinID:
XP_022312734
EnsemblRapid:
LOC111117796
UniProt:
A0A8B8CC59
LinkDB
All DBs
Position
10:complement(11236501..11249588)
Genome browser
AA seq
302 aa
AA seq
DB search
MKYTKRTLQLSVVLLLASVLLVLYHFGFVFNIDCIYKSCSQFARCCPKLVGNFHPDLRLI
SSEEMANKFYWVHEGGRYSLSDVSSDVTRVAILIPFRKREEHLQILLNNLHPFLYKQQLD
YTVYVVDQVDEKPFNKGKLYNIGYTEAKKNNHTCYVFHDVDLIPENDHNLYGCVRSPMHL
SRAIDKYNYSLPDVKLIGGVSAWRTEEFERVNGWSNLFWFWGGEDDDMSYRIMANRLPIY
RFRNSVARYLMLKHRQSTVNTARYRILKDSHIRYKFDGLSSLVYIPPDIQQTPLYTRILV
KL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaccaagaggaccttacagttgagtgtggttcttctcctggcttcagtgttg
ttggttttatatcacttcggctttgtattcaacatcgactgcatatacaagtcatgttct
cagtttgcgaggtgctgtccaaaattagtcggcaattttcatccagacctccgactaatt
tcctcagaggagatggcgaacaaattttactgggtccatgagggcggccgttactcacta
agtgacgtcagcagtgacgtaacacgggtcgccatactgatacccttccggaagagagaa
gaacacttgcaaatcttgctgaacaatctgcatccatttctttacaaacaacagttagat
tacacagtttatgttgtagatcaggtcgatgaaaaacccttcaacaaaggaaagctctat
aacataggctacacggaagccaaaaagaacaatcacacgtgttacgtttttcacgatgtg
gacctgattcctgagaacgaccacaatctgtatggatgtgtccggagtcccatgcattta
tccagagccattgacaaatacaactacagcttacctgatgttaaactgattggcggagtc
tctgcgtggaggacggaggagtttgagcgggtgaacggctggtccaaccttttctggttc
tggggaggggaggatgatgatatgagttataggataatggccaatagattaccaatttac
cgtttccggaactcggtggcaaggtatctgatgctgaaacacagacaatccacggttaac
actgctaggtaccggattctgaaggacagtcacatccgatataagtttgatggattatcg
agtttggtttacataccgcccgatattcaacagactccattatatactagaatattagtc
aaactatag
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integrated database retrieval system