Crassostrea virginica (eastern oyster): 111122052
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Entry
111122052 CDS
T09197
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111122052
Enzymes [BR:
cvn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
111122052
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
111122052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
AP_endonuc_2
TraT
Motif
Other DBs
NCBI-GeneID:
111122052
NCBI-ProteinID:
XP_022319291
EnsemblRapid:
LOC111122052
UniProt:
A0A8B8CTV8
LinkDB
All DBs
Position
2:51781820..51790176
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AA seq
547 aa
AA seq
DB search
MPVADSSLLDDIEDIVNKNSSPLDVRQENKRHVVPKARRFKQVKEEPIQTDSIIPGTQKV
WLKTWGCSHNNSDSEYMAGQLASYGYTITDDSEAADLWLLNSCTVKNPAEDHFRNEIKKA
REKEKKIVVAGCVPQGQPRADYLQGLSVIGVQQIDRVTEVVEEALKGHSVRLYGQKKQEG
KKTGGAALSLPKIRKNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPEEIVARAKQSF
EEGVVELWLTSEDLGAYGHDIGVTLPELLWKLVEVIPEGTRMRLGMTNPPYILEHLEEMA
RILQHPRVYSFLHVPVQSASDSVLMDMKREYCQADFRHVADFLKERVPGVTIATDVICGF
PTETEQDFEETLKLVEEYKFPSLFINQFFPRPGTPAAKMPRIPAQQVKRRTKKISELFHS
YRPYDHKLHEVQQVLVTEISHDQQYFVGHNKYYDQVLVPKNENLMGKMVTVQIVETGKHF
LKGRLLSENCVVQPDVPLPLKKGQVSGVSEQVQAEKTSNQNVIMAISLLVVLLAVTWRFY
SLFLGTT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggctgattcttctcttcttgatgacatagaagacattgtcaataaaaattct
tcacctctggatgtaagacaggaaaacaaaaggcatgttgtcccaaaagcccgacgattt
aagcaagtaaaagaagaacctattcagacagacagcattattccaggtacacagaaggtt
tggctcaagacctggggatgttcccacaacaactcagacagtgaatacatggctggtcag
ctggcttcctacggatacacaatcacagatgacagtgaggctgccgacctatggctactc
aacagttgcaccgtcaaaaatccagccgaggaccacttcaggaacgagattaaaaaagcc
agggagaaagagaagaagattgtggtggcggggtgtgtgccccagggtcagccacgggca
gactatttacagggcctaagtgtcataggagtgcagcagattgaccgggtcacagaggtc
gtggaggaagccctgaaaggtcactctgtgagactttatggacagaaaaaacaagaagga
aagaagacagggggtgcagccctgagtctgccgaaaatccggaagaaccccctcatagaa
atcatcgccatcaacacagggtgcctaaatcagtgtacctattgtaaaaccaagcatgcc
cgtggggagttgggaagttaccccccagaggagattgtggcgcgtgccaagcagtctttt
gaggagggggtagtagaattatggctgacttctgaggatcttggtgcctatggtcatgac
attggagtaaccttaccagagttgctatggaaactagtggaagttattccagagggcacc
agaatgagacttggaatgacaaaccctccctacatcctagagcatcttgaggaaatggcc
cgaattctccagcacccccgagtatactcttttctccacgttccagtacagtctgcgtca
gacagcgtcctgatggacatgaagcgggaatactgtcaggccgatttcagacacgttgca
gacttcctcaaagaaagagtgccaggtgttaccatagcaacagatgttatatgtggattc
cccacagaaacagaacaagattttgaagaaactctgaaacttgtagaagaatacaaattc
ccgagtctgtttatcaaccagttctttcccaggccaggaacacctgcagcaaagatgcca
agaatacctgcccaacaggtcaaacgaagaacaaaaaagatttctgaattatttcattca
tacagaccctatgatcacaagctgcacgaggtacagcaggttctggtcacagaaatctca
cacgaccagcagtactttgtaggccacaacaagtactatgaccaggttctggtcccaaag
aatgagaatctgatgggcaagatggtgactgtgcagattgtagagactggcaaacatttc
ctgaaagggcgacttctgtctgagaactgtgtggttcagccggatgttcctctccctctg
aagaaaggccaagtgtccggagtctctgagcaagtgcaggcggagaaaacctccaatcag
aatgtgataatggcgatttctctgttggtggtgctcctggcggtgacatggcggttttac
agtcttttcctggggacgacgtga
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