Chlorella variabilis: CHLNCDRAFT_137624
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Entry
CHLNCDRAFT_137624 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cvr
Chlorella variabilis
Pathway
cvr03030
DNA replication
cvr03410
Base excision repair
cvr03420
Nucleotide excision repair
cvr03430
Mismatch repair
cvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHLNCDRAFT_137624
03410 Base excision repair
CHLNCDRAFT_137624
03420 Nucleotide excision repair
CHLNCDRAFT_137624
03430 Mismatch repair
CHLNCDRAFT_137624
03440 Homologous recombination
CHLNCDRAFT_137624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvr03032
]
CHLNCDRAFT_137624
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_137624
Enzymes [BR:
cvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHLNCDRAFT_137624
DNA replication proteins [BR:
cvr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CHLNCDRAFT_137624
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CHLNCDRAFT_137624
MMR (mismatch excision repair)
DNA polymerase delta complex
CHLNCDRAFT_137624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
17358855
NCBI-ProteinID:
XP_005851095
JGI:
ChlNC64A_1_137624
UniProt:
E1Z446
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MAPKRRAPEPSGPVTPKKPGVQIAYERPAAAPRSIHLRRQRPRPAAPPPGEGLIFMALDV
VEEAQGRFHVWGTTPGGASVLLRLPNFQPYFYVAAPKAQAEGADQDGMLNRILPNDCRLA
GIDAVLRTPILFYRPDRPEGEPYLKLTLGTGASVKRASAAVQKAMVAGHLRQEGLVWRDM
TLYEAEVAPLQRLLVDVPVSGGAWLYVPPPADAQPGGATGGSLHAAGAAATQQRGGSAAG
WRGVEGGERVSSCDIEVVAPWQAVCCLTPDATQLADPAWSPFPGGGSGGGGPAGPAEQPE
EVQAAAAAAKRGDIAGLRMMLLDVLSATADGSDRVAVASQGDPVVAITCTFFHFAARGHA
EGPTAPAQGEQPAQEGGVATGDASVAAFGDGGGSGEGDDEEEAAVVASLAAVAGAPTGVG
SRRPPAVTPPAAPAAAAEQPETLVFLLHPAAAAQRQEAAERSVGSPHGDGAARVLLFGSE
EALLVSWAQCVRQADPDVNDTLAVLKDRFAALRLEGGNLQAGGAPACTLSRLLPRAAKPL
AIRKITMYSAQWVRSQSRMNSNSNQETFRADIDGRMVVDVLRQALTSQTLTSFSLVDCVQ
SLLGQTIEVLSPARLAGLAGLAGPPPHPLHHGRLAPAAAAAADAARVARYALRRCDAVGS
LLHRLATLQEMVELARATGLTLQQAVYNAQMVRTNSLLLRTARRQRFLVPGRQESQSLQE
HTFIMHPVSYQAQIVRSWSLVLRTAARHRPGLVVGGRENPMALSESPFLLHPVEHGTVGL
YRQPVAILDFASLYPSIYRAHNLCYSTLVHKDDVGAAFVKPSVRQGILPGILAALIVARG
ATRELLKAASDPAARAVLDSRQKALKVTANALYGFTGAGASPLQCIQLADSCLAYGAQSC
RRAKEVLEAAAGGGELAPYGSGARVIYGHTDSLFVLLPEAADAKQAIAAGRLASRVVSAA
FPDPMDLKFERVCLPFLLLHVNRYAGRAFERDEDVGRGGELICKGVKSMWRQTAPILRTT
LHGALVRILMQDDVRGALEFVCGQVRRLLSGQVELSELVMTGGLWRVTGQQVENAAAAAG
EGGPSPEDVKGPHASLAVRLSQRDPGRAFVLGQRLPYVLLAGERLQEDAAEDPLTAAKAS
ALGLGLLLEHRHPADLAGQEGDYGLYWQKKLLTPLVEVFQASVPPGQREAVLHELKGGEH
SRVRVDAALSPPPPALGPASPPPRARGGTNGRGPAGAPRQSQMARFFQPIPNKEGKWEET
YLGLLGEQAGVEARQCSAYATCRGCHSGGALEPVLCDNGECPVTYSRLACSSRLQQLDAQ
LRRLDIF
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaaacgccgagccccggagcccagtggccctgtcacgcccaagaagccggga
gtgcagatcgcctatgagcggcctgccgcggcgccgcgctcgatacacctgcgccgccag
cgcccgcgcccggcggcgccgccgcctggcgaaggcctcatcttcatggctctggacgtt
gtggaggaggcgcagggccggttccacgtgtggggcacgacccccggcggcgccagcgtg
ctgctgcgcctgcccaacttccagccgtacttctacgtcgccgcgcccaaggcgcaggcg
gagggggccgaccaagatggcatgctcaaccgcatcctgccgaacgactgccgcctggcc
ggcatcgatgcggtgctgcgcactcccatcctgttctacaggccagaccgcccagagggc
gagccttacctgaagctcaccctgggaacaggtgccagcgtgaagcgcgcctcggcggcg
gtgcagaaggccatggtggcaggccacctgcgccaggagggccttgtgtggcgggacatg
acgctgtatgaggcggaggtggcgccgctgcagcgcctcctggtggacgtgcccgtcagc
ggcggcgcctggctgtacgtgccgccgccagcggacgcgcagcccggcggcgctaccggc
ggcagcctgcatgctgccggggcggcggcgacgcagcagcgcggcggcagcgccgcgggc
tggcgtggagtggagggtggggagcgcgtcagcagctgcgacatcgaggtggtggcaccc
tggcaggcagtgtgctgcctgacgcctgatgccactcagctggcagaccccgcctggagc
cccttccccggcggcggcagcggcggcggcggtccagcgggcccagcggagcagccggag
gaggtgcaggcggcggcggcggcggccaagcgcggagacatcgccgggctgcgcatgatg
ctgctcgatgtgctgtcggccactgctgatggctcagacagggtggcggtggcctcccag
ggcgacccggtggtagcaatcacctgcactttcttccactttgccgcgcgggggcatgcc
gagggccccacagcgcctgcccagggggagcagccggcgcaggagggcggggtagcgaca
ggagacgctagcgtggcggcgtttggagatggcggcggcagcggggagggcgacgatgag
gaggaggcggcggtggtggcctctctggcggcggtagcgggagcccccacaggcgtcggc
agccgccgaccgccggcggtcaccccgccggcggccccagccgcagcagcggagcagcca
gagacgctggtgttcctgctgcaccccgcggcggcggcgcagcgccaagaggctgctgag
cggagcgtgggctccccgcacggcgacggcgccgcgcgggtgctgctgtttggctcggag
gaagcgctgctggtcagctgggcgcagtgcgtgcggcaggcagacccggatgtgaatgac
acgctggcggtgctgaaggaccggtttgcggcgctgcgcctggagggcggcaacctgcag
gcgggtggagcccctgcctgcactctgtcgcggctgctgccgcgcgccgccaagccgctg
gcgatccgcaagatcaccatgtacagcgcgcagtgggtgaggagccagagccgcatgaac
agcaacagcaaccaggagacgttcagggcggacatcgacggccgcatggtggtggatgtg
ctgcgccaggcgctcacctcccagaccctcacctccttctccctcgtcgactgcgtgcag
agcctgctggggcagacgattgaggtgctgagccccgcccgcctggcggggctggccggc
ctggcgggcccgccgccccacccgctgcaccacgggcgcctggctcccgcggctgccgcc
gcggcggatgcggcgcgggtggctcgctacgccctgcgccgctgcgacgcggtgggcagc
ctgctgcaccgcctggccacgctgcaagagatggtggagttggcgagggccacagggctc
actctgcagcaggcggtttacaatgcacagatggtccgcacaaacagcctgctgctgcgg
acggcgcggcggcagcgtttcctcgtgcccgggcggcaggagtcgcagagcctgcaggag
cacaccttcatcatgcaccccgtgtcataccaggcacagatagtgcggtcctggagcctg
gtactgcgcaccgccgcacgccaccggcccggcctggtggtgggcgggcgggagaacccg
atggcgctgtcggagagccccttcctgctgcaccctgtcgagcacggcacggtggggctg
taccgccagccggtcgccatcctggactttgcctcgctctacccctccatctaccgagcg
cacaacctgtgctactcaaccctggtccacaaggacgatgtgggcgcggccttcgtcaag
ccctctgtgcgccagggcatcctgccgggcatactggcagcgctcatcgtggcccgaggc
gccacccgcgagctcctcaaggccgcctccgaccctgccgcccgcgcggtgctggacagc
cgccagaaggccctcaaagtgacggccaacgctctgtacggcttcaccggcgcgggcgcc
tcgccgctgcagtgcatccagctggcagacagctgcctggcttacggcgcgcagagctgc
aggcgggccaaggaggtgctggaggcggcggcaggcggcggggagctggcaccctacggc
agcggcgcgagggtcatctacggccacaccgacagcctgtttgtgctgctgccagaggcg
gcagatgcgaagcaggcgatcgcggcgggcaggctggcatcccgtgtggtcagcgccgcc
ttcccagatccgatggacctcaagtttgagcgggtgtgcctccccttcctgctgctgcac
gtcaacaggtatgcggggcgggcatttgagcgggacgaggatgtggggcgtggcggggag
ctgatctgcaagggagtgaagagcatgtggcggcagaccgcccccatcctgcgcaccacg
ctgcacggcgcgctggtccggatcctgatgcaggacgatgtgcgcggcgccctggagttt
gtgtgcggccaggtgcggcggctgctgagcgggcaggtggagctaagtgagctggtgatg
acgggcgggctgtggcgggtgaccgggcagcaggtggagaatgcggcggcggcggcgggg
gagggggggcccagcccagaggacgtcaagggcccccacgcctcgctggcggtgcggctg
agccagcgcgacccgggccgcgcctttgtgctgggccagcggctgccgtatgtgctgctg
gctggggagcggctgcaggaggatgctgctgaggacccactgactgccgccaaggcaagc
gccctgggtctggggctgctgctcgagcaccggcatcccgcagaccttgcggggcaggag
ggcgactatgggctgtactggcaaaagaagctgctgactccgctggtagaggtgttccag
gccagcgtaccgcccggccagcgggaggctgtactgcatgagctcaagggaggggagcat
agccgcgtgcgggtggatgcagccctcagcccgccgccgcccgcgctggggcccgccagc
ccgccaccgcgggcgcgcggcggcaccaacggcagaggcccagcaggcgccccccgccaa
tctcagatggcccgattcttccagcccatccccaacaaggagggcaagtgggaggagaca
tacctagggctgctgggagagcaggccggggtggaggcccgccagtgcagcgcgtacgcc
acctgccgcggctgccacagcggcggcgccctcgagcccgtgctgtgcgacaacggagag
tgccccgtcacgtatagccgcctggcctgcagcagccggctgcagcagctggacgctcag
ctgcgccgcctggacatcttctga
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integrated database retrieval system