Chlorella variabilis: CHLNCDRAFT_139631
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Entry
CHLNCDRAFT_139631 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
cvr
Chlorella variabilis
Pathway
cvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CHLNCDRAFT_139631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_139631
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CHLNCDRAFT_139631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_III
MutS_I
MutS_IV
Motif
Other DBs
NCBI-GeneID:
17351404
NCBI-ProteinID:
XP_005844133
JGI:
ChlNC64A_1_139631
UniProt:
E1ZQK6
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MAPKKSSEPLAGQRSISAFFAAKPKPAQADAAAASPAKLLKPAAKADVKAAKDSTALAAA
AAAAPTQGAAPPAAAKSSQQAAAAPAAAAAAVPPRKAGKGKPAGKNEKSKGKAGEAAVAG
SGAAAIGPDVVGKSVRVYWPSEGTWFTGDIQGTSLQRQPCAQPCAEAGQQAWSGASGRQG
RRCARPKYNGASGKCLVLYDDGDEEWVDLRAEKFAWADRQQDKARQAAGRKRKAAIVESE
SEAEAGEASGSEYAASEDAESSDEEAASLADEEEDEDEEDEEMEEEELSVESGPPKGKRA
AAASGGGGVKKAAAPRGGGKAGATPVAVNGSVGLTPGSAAAAGLPAAAGTAGRTAARPAR
PSLPALTPGTGATPASLARALGGTPLTGGAGEGDAPASALQEELAPRFSGRVDAAFPFLH
PDRIRDAARRRPDDLDYDPRTLYVPPEWLRQNKVSPGQQQWWEFKAQHYDCVLLFKMGKF
YELFEMDAHVAVEVLGLSYMKGDKPHAGFPEAAYHGMAERLARAGHKVVVIEQVETPEML
KARNEERARKGLKRDAVVRREKVAVLTQGTLTDAEMVAAQPEAAYLLALAELPVPDALMA
AAEHSGAPPCVWVGACAVDAATGQMLVGQWLDDELRSQFWDAYSVWSQVDAAGYWPEGAA
LPPALHAVRAGGEAQAAAAHALGGCLSHLRCVLLDKQVLAAGRVEQLGETFGIGAGLAGS
GCEAGGGGPTHMALDGAALENLEVLENSEGGPEGTLLAALDNCVTPAGRRRLRQWLCRPL
ARIPDIQARQDAVAELMGSAEEAAGAARALFKGVADLERAVARITAAGAGLGSARDAPHV
ILYEDVARRRVKAYAAALKGLQQIQDAAAAFQELGDGISSSLLRRLVTPGELFPDMAAAL
AEMQSATDWAEAEASGRVEPARGVDGAYDAALDAIDAAQAALQAHLAEARRAGARVPASW
EPAQSKKGVKRYTSAALRELVKGLEAAHDAKEKAQGGILQGMMRAFSQRKALWGAAVDCM
AQLDALMSLAVAAACGSGTMCRPKLVPWSPAGEAGRRAGGRGGVCGRGEACAGC
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaaaaagagcagcgagccccttgcagggcagcgctccatctccgcattcttt
gccgccaagcccaagcccgcccaggccgatgctgccgccgcctcgcccgccaagctgctg
aagccggcggcaaaggcagatgtgaaggcggccaaggacagcaccgccctggcggctgct
gcagccgcagcgcccacgcagggtgccgcgccgcctgcggctgcgaagagcagccagcag
gccgcggctgcgccagcagctgccgccgcagcggtgccgccgcgcaaggcgggcaagggc
aagccggccggcaagaacgagaagagcaagggcaaggccggggaggcggcggtggccggc
agcggcgccgcagccattggcccggacgtggtgggcaagtcggtgcgcgtgtactggccc
agcgagggcacctggttcacaggcgacatccaaggcacgtcgctccagcgccagccctgc
gcccagccctgcgccgaggcggggcagcaggcctggagcggcgccagcgggaggcagggc
cggcgctgtgctcgcccaaagtacaacggtgccagcggcaagtgcctggtgctgtatgat
gatggggatgaggagtgggtggacctgcgggcagagaagtttgcctgggcagaccgccag
caggacaaggcgcggcaggcggcgggccgcaagcgcaaggcggcgattgtggagagcgag
agcgaggcggaggcgggggaggcgtctggcagcgagtatgcggccagcgaggatgcggag
agcagcgacgaggaggctgcctcgctggcggatgaagaggaggatgaggatgaggaggat
gaggagatggaggaggaagagctgtcggttgagagtgggccgcccaagggcaagcgcgcg
gcggcggcatccggcggcggcggcgtcaagaaggccgccgcacccaggggcggcggcaag
gcgggggcgacccccgtggccgtcaacggcagcgtgggcctgaccccgggctccgccgcc
gccgcgggcctgccggcagcagcgggcaccgcgggccgcaccgcggcgcgccccgcgcgg
ccgtccttgccggcactcacgcccggcaccggcgccacgcccgcctcgctggcgcgcgcc
ctgggcggcacccccctgaccggcggcgcaggcgagggcgatgcgccggccagcgcgctt
caagaggagctggcgcctcggttcagcggccgcgtagacgccgccttccccttcctgcac
ccagaccgcatccgggatgccgcccggcggcggccagacgacctagactacgacccccgc
accctgtatgtgcctcccgagtggctcaggcagaacaaggtgtccccggggcagcagcag
tggtgggagttcaaggctcagcactacgactgcgtactgctgttcaagatgggcaagttc
tacgagctgtttgagatggatgcgcatgtggcggtggaggtgctggggctcagctacatg
aagggcgacaagccgcatgcgggcttcccggaggccgcctatcacggcatggcggagcgg
ctggcgcgggcggggcacaaggtggtggtgattgagcaggtagaaacccccgagatgctc
aaggcccgcaacgaggagcgggcgcgcaaggggctcaagcgggatgccgtggtgcggcgg
gagaaggtggcggtgctgacgcagggcaccctgaccgatgccgagatggtggcggcgcag
ccggaggcggcctacctgctggcgctggcggagctgccggtgccggacgcgctcatggcc
gccgccgagcacagcggcgcgcctccctgcgtgtgggtgggcgcctgcgccgtggacgcc
gccacgggacagatgctggtggggcagtggctggacgacgagctgcggtcgcagttctgg
gatgcgtactcggtgtggagccaggtggacgcggcagggtactggccggagggcgcggct
ctgccgcccgctctgcacgccgtgcgggcgggcggcgaggcgcaggcggcggcggcgcac
gcgctgggcggctgcctcagccacctgcgctgcgtgctgctggacaagcaggtgctggct
gccggccgcgtggagcagctgggggagacatttggcatcggcgccgggctggcgggcagc
ggctgtgaggcgggcggcggtggccccacacacatggccctggacggcgcagccctggaa
aacttggaggtgctggagaactcggaaggggggcctgagggcacgctgctggcggcgctg
gacaactgcgtgacgcccgcagggcgccgccgcctgcgccagtggctgtgccgcccgctg
gcgcgcatccccgacatccaggcgcggcaggacgcggtggcggagctaatggggagcgcc
gaggaggcggccggcgccgcgcgcgcgctcttcaagggcgtggcggacctggagcgtgcg
gtggcgcgcatcacggcggcaggggcggggctggggtctgcgcgggacgcgccgcacgtc
atcctgtacgaagatgtggccaggaggcgggtcaaggcgtatgcggcggcgctcaagggg
ctgcagcagatccaggacgcggccgccgccttccaggagctgggcgacggcatcagcagc
agcctgctgaggcgcctggtcacgcccggcgagctgttcccggacatggcggcggcgctg
gctgagatgcagagcgccaccgactgggcggaggcggaggccagcgggcgggtggagccc
gcacggggcgtggacggcgcctacgatgccgccctggatgccatcgacgcggcgcaggcg
gcgctgcaggcccacctggcggaggcgcggcgcgcgggcgcgcgcgtgcctgccagctgg
gagccggcgcagagcaagaagggcgtgaagcggtacaccagcgccgcgctgcgggagctt
gtgaaggggctggaggcggcgcacgatgccaaggagaaagcgcagggcggcatcctgcag
ggcatgatgcgcgcgttttcgcagcgcaaggctctgtggggcgccgccgtggactgcatg
gcccagctggatgcgctgatgagcctggcggtggcggcggcgtgcggcagcggcaccatg
tgccgccccaagctggtgccctggagccccgcgggtgaggcggggcgcagggcaggaggc
cggggaggcgtgtgtgggcggggggaggcatgtgcaggctgctaa
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