Chlorella variabilis: CHLNCDRAFT_19538
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Entry
CHLNCDRAFT_19538 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvr03016
]
CHLNCDRAFT_19538
Enzymes [BR:
cvr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
CHLNCDRAFT_19538
Transfer RNA biogenesis [BR:
cvr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
CHLNCDRAFT_19538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
SPL
Motif
Other DBs
NCBI-GeneID:
17358002
NCBI-ProteinID:
XP_005850579
JGI:
ChlNC64A_1_19538
UniProt:
E1Z5I3
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MEDVVADIEDVHLELDGESGRADRLLEAHVQRVSKAGTGAQQQAAEPPWGAAAAAASDGG
SVVPGTQRIWVKTFGCSHNSSDSEYMMGQLQEYGFKLVDEADSAAADLWLLNTCTVKSPS
QSAMDTLLRRGRRLGKALLVAGCVPQGDRRTAELRGLSLLGVTQIDRVVEAVEETLKGHT
VQLLAKKALPRLDLPKVRRNRHIEILPLSTGCLGACTYCKTKHARGQLGSYDPAELVRRA
AAAAADPQVREIWLSSEDTGAYGRDIGTSLPALLRELVEVLPPDGRCMLRVGMTNPPFIL
EHLAEVGAILRDDRVFSYLHVPVQSGSDAVLTAMRREYSAAQFRRVCDTLLAAVPGLELA
TDIICGFPGETEEDHGATLALLDKYRFPHCHISQFYPRPGTPAARMRRVPTAVVKQRSRE
VTAAVESWCGSYSGLVGATQRCCVVDTAADGVHAVAHNKAYTQVLVPAEAPDGSGSLLGC
VVEARVVSASRWSVKAEVV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtggtggcagacatcgaggacgtgcacctcgagctggatggcgagtcgggg
cgtgcagacaggctgttagaggcccatgtgcagcgtgtgagcaaggcgggcacaggcgcc
cagcagcaggcggcagaaccgccgtggggagccgccgctgccgccgccagtgatggcggc
tcggtcgtgccgggcacccagcgcatctgggtgaagacgtttggctgctcccataactcc
agcgacagcgagtatatgatgggccagctgcaggagtacggcttcaagctggtggacgag
gcggatagcgctgcggccgacctgtggctgctgaacacgtgcacagtgaagagccccagc
cagtcagcgatggacacgttgctgcggcgggggcgccggctgggcaaggcgctgctggtg
gcgggctgcgtgccgcagggcgaccggcggacggcggagctgcgcggcctgtcgctgctg
ggcgtcacgcagatcgaccgcgtggtggaggcggtggaggagacgctcaaggggcacacc
gtgcagctgctggccaagaaggcgctgcccaggctggatctgcccaaggtgcggcgcaac
cggcacatcgagatcctgccattgtccacggggtgcctgggcgcctgcacatactgcaag
accaagcacgcccgtggccagctgggcagctacgacccagctgagctggtgcggcgtgcg
gcggcagcggcagcagacccgcaggtgcgggagatttggctgagcagcgaggacaccggg
gcctatgggcgcgacatcggcaccagcctgcccgccctgctgcgggagctggtggaggtg
ctgccgccggacgggcggtgcatgctgcgcgtgggcatgaccaacccgcccttcatcctg
gagcacctggcagaggtgggggccatcctgcgggacgaccgagtcttctcataccttcac
gtgccggtccagtctggcagcgacgcggtgctgacggccatgcggcgagagtacagcgcc
gcgcagttccggcgcgtgtgcgacacgctgctggcggcggtgccggggctggagctggcc
acagacatcatctgcggcttccccggtgagactgaggaggaccacggcgcgacgctggct
ctgctggacaagtaccgcttccctcactgccacatctcgcagttctacccgcggcccggc
acgcccgcggcgcgcatgcggcgcgtgcccactgccgtggtcaagcagcgcagccgggag
gtgaccgcggcggtggagtcatggtgcggctcgtactcgggcctggtgggcgcaacccag
cgctgctgcgtggtggacaccgccgcagacggcgtgcacgctgtggcgcacaacaaggca
tacacacaggtgctagtgcctgccgaggcgcccgacggcagcggcagcctgctgggttgc
gtggtggaggcgcgggtggtgtctgccagccgctggtcggtcaaggcagaggtggtg
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