Campylobacter vulpis: CVULP_0561
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Entry
CVULP_0561 CDS
T08642
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cvu
Campylobacter vulpis
Pathway
cvu00540
Lipopolysaccharide biosynthesis
cvu01100
Metabolic pathways
cvu01250
Biosynthesis of nucleotide sugars
Module
cvu_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CVULP_0561 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cvu01005
]
CVULP_0561 (waaD)
Enzymes [BR:
cvu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CVULP_0561 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
cvu01005
]
Core region
CVULP_0561 (waaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Ldh_1_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QNF77603
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All DBs
Position
complement(562239..563186)
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AA seq
315 aa
AA seq
DB search
MRIVITGGAGFIGSNLALALQEKHEVLIIDKMRSDKRLDNGNLESFGHFKNLLDFKGELF
VGDICEAKSFDVMREFKPDIIFHQAAISDTTAYNQTQVLSVNLNSFKDFIKLAIKCDSKL
IYASSASVYGDMPSPQKVGFEEPKNPYAFSKLMMDKLAQKYFNELHIVGLRYFNIYGKNE
FFKGKTASMVLQFGLQILSGKNPRLFEGSEKIYRDFTYIKDVVNANLRALETKSGIYNVG
SGKARSFKDIVDILQKEFGTNLAYKWIENPYKKAYQFHTQAHLSENFYKGEFELEDGIKD
YLPEIKRIFEKEYNA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatagtcatcacaggaggagcgggctttatcggctcaaatttagctcttgctcta
caagaaaagcacgaagttttaatcatcgataaaatgcgaagtgataaaaggctagataat
ggaaatttagagagctttgggcattttaaaaatttgcttgattttaagggagaacttttt
gtaggtgatatttgtgaggctaaaagctttgatgtgatgcgtgaatttaaacctgatatt
atctttcatcaagcagccatttcggacaccacagcttataatcaaacccaggttttaagc
gtgaatttaaatagctttaaagattttattaaacttgccattaagtgcgattctaaactc
atttatgcaagttcggctagcgtgtatggagatatgccaagccctcaaaaagtaggcttt
gaagagcctaaaaacccttacgctttttctaagttaatgatggataaacttgcacaaaaa
tatttcaatgaacttcacatcgtggggctacgctattttaacatttatggaaaaaatgaa
ttttttaagggtaaaaccgcttcgatggttttacaatttggcttacaaattttaagtggg
aaaaatccgcgtttatttgagggaagtgagaaaatttatagggattttacctatataaaa
gatgttgtaaatgcgaatttaagagccttagagacaaaaagtggaatttataatgtaggc
agtggtaaggcaaggagttttaaggacattgtggatattttacaaaaagaatttggcaca
aatttagcctataaatggatagaaaatccttacaaaaaagcttatcaatttcacacccag
gcacatttaagcgagaatttttataagggtgaatttgagcttgaagatgggattaaggac
tatttgcctgagattaaacgcatttttgaaaaggaatataatgcttga
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