Citrobacter werkmanii: CO701_16635
Help
Entry
CO701_16635 CDS
T05129
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cwe
Citrobacter werkmanii
Pathway
cwe00730
Thiamine metabolism
cwe01100
Metabolic pathways
cwe01240
Biosynthesis of cofactors
cwe04122
Sulfur relay system
Module
cwe_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CO701_16635
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CO701_16635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cwe03016
]
CO701_16635
Enzymes [BR:
cwe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CO701_16635
Transfer RNA biogenesis [BR:
cwe03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CO701_16635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ATF50627
LinkDB
All DBs
Position
complement(3308696..3310144)
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDEDLAVVRHWDHVEVRAKDETQR
LDIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHIESARVKLTKPDVTVNLEIENDRLLLVKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIINLAREIGTEDFARTMPEYCGVISKSPTVKAIKAKI
EAEEENFDFAILDKVVEEANNIDIRDIAQQTEQAVVEVETVSGFGPNDVILDIRSVDEQD
DKPLKVEGVDVVSLPFYKLSTHFGDLDQNKTWLLWCERGVMSRLQALYLREQGFANVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccatcaaaagccaatctgtgcgtttg
cgctttataaaaattctgacagggaacatccgtaacgttttaaaacactatgatgaagac
cttgctgtcgtccgccactgggaccatgttgaggttcgcgccaaagatgaaacccagcgt
ctggatattcgtgacgcgctgacccgcattccgggtatccaccatattctcgaagtggaa
gacgtgccgtttaccgatatgcacgatatcttcgagaaagcgctggtgcagtaccgtgat
caactggaaggcaaaaccttctgcgtgcgcgtgaagcgccgtggtaagcatgagtttagc
tccattgaagtggaacgttatgttggcggtgggctgaatcaacatattgaatccgcgcgc
gtgaagctgaccaagcctgatgtgaccgtcaatcttgaaatcgaaaacgaccgactgctg
ctggtgaaaggtcgctacgaaggtattggcggctatccgattggcacccaggaagacgta
ctgtcgctgatttccggcggttttgactctggcgtttccagctatatgctgatgcgtcgc
ggctgtcgcgtgcactactgcttctttaacctcggtggtgcggcgcacgaaatcggcgtt
cgtcaggtggcgcattacctgtggaaccgcttcgggagttcgcatcgcgtacgttttgtc
gccatcaactttgaaccggtggtgggtgagatcctcgagaaagttgacgatggccagatg
ggcgtggtcctcaagcgtatgatggttcgcgcggcgtctaaagtggccgagcgctacggc
gtccaggcgctggtgaccggtgaagcgcttgggcaggtatccagccagacgctgactaac
ctgcgtttgatcgacaacgtctccgacacgctgatcctgcgtccgctgatctcgcacgat
aaagaacacatcattaatctggcgcgtgaaattggtaccgaagactttgctcgtaccatg
ccggaatactgcggtgtgatctcaaaaagcccgacggtaaaagccattaaagcgaagatt
gaagccgaagaagaaaacttcgattttgccatcctcgataaagtagtggaagaagccaat
aatatcgatatccgcgatatcgcccagcagaccgagcaggccgtggtggaagttgaaacc
gtgagcggttttggccccaacgacgtgattctggatatccgctctgtggatgaacaggat
gataagccgctgaaagtggaaggcgtggacgtggtttcgctgccgttctacaagctgagt
acccactttggcgatttggaccagaataaaacctggctgctgtggtgtgaacgcggtgtg
atgagccgcctgcaggcgctgtatctgcgcgagcagggttttgcaaacgtgaaggtgtat
cgcccgtag
DBGET
integrated database retrieval system
