Citrobacter werkmanii: CO701_17500
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Entry
CO701_17500 CDS
T05129
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
cwe
Citrobacter werkmanii
Pathway
cwe00310
Lysine degradation
cwe01100
Metabolic pathways
cwe01110
Biosynthesis of secondary metabolites
cwe01120
Microbial metabolism in diverse environments
Module
cwe_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
cwe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
CO701_17500
Enzymes [BR:
cwe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
CO701_17500
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
ATF50778
LinkDB
All DBs
Position
complement(3500882..3503032)
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AA seq
716 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELERALLQQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLELCSDINQLNEYLPLYAFINTHSTMDVSAHDLRMALWFFEYALGQSDDIATRIRQY
TNEYLDNITPPFTKALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPTGSTLLI
DRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPKREFTRESIERKVGGTAQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF
ETQSTHKMLAALSQASLIHIKGDYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNS
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPEKVDEAECWPVAPGEDWHGFTDAD
ADHMFLDPVKVTILTPGMDEQGNMSDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHNLIRQH
DLSGLMLRAFDTLPEMKMTPHQAWQRQIKGEVETVTLDQLVGRISANMILPYPPGVPLLM
PGEMITEDSRAVLDFLLMLCSVGHHYPGFDTDIHGAKLGEDGVYRVRVLKMASQLA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattgccatcatgggaccgcatggcgtcttttataaagatgagcccatcaag
gaacttgaacgtgcactactgcagcagggatttcagattatctggccgcagaatagcgtc
gacctgctgaaatttattgagcataacccgcgaatttgcggcgtcatttttgactgggat
gagtacagcctggagctgtgtagcgatatcaaccagcttaacgaatacctgccgctttac
gcctttatcaatacccattcgacgatggatgtcagcgcacacgacctgcgcatggcgctg
tggtttttcgagtatgctctaggccagtctgacgatattgccacccgaattcgccagtac
accaatgaatacctcgataacatcactccgccgtttaccaaggcgttgttcacctacgtg
aaagaagggaagtataccttctgtacgccggggcacatggcggggacggcataccaaaag
agtccagtgggctgcctgttctatgacttttttggcggcaatacgctcaaggccgacgtc
tccatttccgtgaccgaactggggtcgctgctggaccatactggcccgcacctggaggcc
gaagaatatatcgcccgcacctttggggcagagcagagctatatggtgacgaatggcacc
tcgacgtcgaataaaattgtcggtatgtatgcagccccgaccggaagtacgttactgatc
gatcgtaactgtcataaatcactggcgcatttgctgatgatgagcgacgtggtacccatc
tggctgaagcccacgcgtaatgcgctgggtattcttggcggcatacctaaacgtgaattt
acccgtgagagtattgagcgcaaagtcggagggaccgcccaggcccagtggccagtacat
gcggtgatcaccaactctacctacgacggtctgctgtataacaccaactggatcaaacag
acgttggacgtgccgtctattcactttgactcggcctgggtgccatacactcattttcac
ccgatctatcaggggaaaagcggcatgagcggcgaacgagtacctggtaaggttatcttt
gaaacccagtcgacccacaagatgctggcggcgctgtcgcaggcctctctgatccacatt
aaaggtgactacgatgaagagacctttaatgaagcctttatgatgcatacctcgacgtcg
ccgagctacccgattgtcgcgtcaatagaaacggcggcggcaatgctgcgcggcaactca
ggcaagcgcttaatcaatcgctccgttgagcgtgcgctgcattttcgcaaagaagtacag
cgactgcgggaagaatcggacggctggttctttgatatctggcagccggaaaaggtggat
gaagcggagtgctggcccgttgcgccgggtgaagactggcatgggtttaccgatgccgac
gccgaccacatgttcctcgacccggtgaaagtgactattctgacaccggggatggatgaa
cagggaaacatgagtgacgaagggatcccggcggcgctggtggcgaagttcctcgacgaa
cgcggtgtcgtggtggagaaaacgggtccgtataatctgttatttttgttcagcattggt
attgataaaacccgggcgatggggttgctgcgcgggctgacagagttcaaacgttcgtac
gatctgaatttgcgtgtgaagaatatgctgccagatttgtatgctgaagatccggatttc
tatcgcaatatgcgtattcaggatctggcacaggggatccacaatctgatccgccaacac
gatctctccgggctaatgctacgggcatttgacaccctaccggaaatgaaaatgacgcca
catcaggcctggcagcggcagatcaaaggcgaggtggagacggtgacgcttgaccaactg
gtggggcgcatttctgcaaatatgatcctgccttatcctcccggcgtaccgttgctgatg
ccgggggaaatgatcaccgaagacagccgggcggtgctcgatttcctgttgatgctgtgt
tctgtcggccatcattatcccggattcgacacggatattcatggcgctaaactgggtgag
gacggcgtgtaccgtgtgagagtcctaaaaatggcatcgcagcttgcctga
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