Citrobacter youngae: CD187_18200
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Entry
CD187_18200 CDS
T05526
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cyo
Citrobacter youngae
Pathway
cyo00730
Thiamine metabolism
cyo01100
Metabolic pathways
cyo01240
Biosynthesis of cofactors
cyo04122
Sulfur relay system
Module
cyo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CD187_18200
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CD187_18200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyo03016
]
CD187_18200
Enzymes [BR:
cyo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CD187_18200
Transfer RNA biogenesis [BR:
cyo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CD187_18200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AWV28027
LinkDB
All DBs
Position
complement(3686927..3688375)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDEDLAVVRHWDHVEVRAKDESQR
LDIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHIESARVKLTKPDVTVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIINLAREIGTEDFARTMPEYCGVISKSPTVKAIKAKI
EAEEENFDFSILDKVVEEANNIDIRDIAQQTQQTVVEVETVSGFGPNDVILDIRSVDEQD
DKPLKVEGVDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccagaaatcaccatcaaaagccaatctgtgcgtttg
cgctttataaaaattctgacagggaacattcgtaacgttttaaagcactatgatgaagac
cttgccgttgttcgtcactgggatcacgttgaggttcgcgctaaagatgaaagccagcgc
ctggatattcgcgacgcgctgacccgtattccgggtatccaccacattctcgaagtagaa
gacgtgccgtttaccgatatgcacgatattttcgagaaagcactggttcagtatcgcgat
caactggaaggtaaaaccttctgtgttcgcgtgaagcgtcgcgggaagcatgagtttagc
tccattgaggtggaacgttatgttggcggtggactgaaccaacatattgaatctgcacgc
gtgaagctgacgaagccggatgtgaccgttaatcttgaaatcgaaaacgaccgtctgctg
ctggttaaaggccgctatgaaggtattggtggtttcccgattgggacgcaggaagacgta
ctgtcgctgatttccggcggtttcgactctggtgtatccagctacatgctgatgcgtcgc
ggctgccgtgttcactattgcttctttaaccttggcggcgcagcgcatgaaatcggcgtt
cgccaggtggcgcattacctgtggaatcgcttcggtagttcgcatcgcgtgcgttttgtt
gctatcaactttgaaccggtggtcggtgagatcctggagaaagttgatgacggccagatg
ggcgtggttctcaaacgtatgatggttcgcgcggcgtcgaaagtcgctgagcgctacggc
gtacaggcgctggtaaccggtgaagcactgggccaggtgtccagccagacgctgaccaac
ctgcgtctgatcgataacgtttctgacaccctgatcctgcgcccgcttatctcccatgat
aaagagcacatcatcaatctggcgcgtgaaattggtaccgaggactttgcccgtaccatg
ccggaatactgcggtgtaatttcaaaaagcccgacggtgaaagcgatcaaagcgaagatt
gaggccgaagaagaaaacttcgatttctctatcctcgataaagtggttgaagaagcgaac
aatattgatattcgcgatatcgcccagcagacgcagcagaccgtggtagaagtggaaacc
gtgagcggtttcggcccgaatgacgtaatccttgatatccgttctgtggatgaacaggat
gataaaccgctgaaggttgaaggtgtggacgtcgtttctctgccattctacaagctgagc
actaaattcggcgatctggaccagagtaaaacctggctgctgtggtgtgaacgcggggtg
atgagccgcctgcaggcgctttatctgcgcgagcagggctttgagaacgtgaaggtgtat
cgcccgtaa
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