Citrobacter youngae: CD187_23520
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Entry
CD187_23520 CDS
T05526
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cyo
Citrobacter youngae
Pathway
cyo00071
Fatty acid degradation
cyo00280
Valine, leucine and isoleucine degradation
cyo00310
Lysine degradation
cyo00362
Benzoate degradation
cyo00380
Tryptophan metabolism
cyo00410
beta-Alanine metabolism
cyo00640
Propanoate metabolism
cyo00650
Butanoate metabolism
cyo00907
Pinene, camphor and geraniol degradation
cyo00930
Caprolactam degradation
cyo01100
Metabolic pathways
cyo01110
Biosynthesis of secondary metabolites
cyo01120
Microbial metabolism in diverse environments
cyo01200
Carbon metabolism
cyo01212
Fatty acid metabolism
Module
cyo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CD187_23520 (fadB)
00650 Butanoate metabolism
CD187_23520 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CD187_23520 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CD187_23520 (fadB)
00310 Lysine degradation
CD187_23520 (fadB)
00380 Tryptophan metabolism
CD187_23520 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CD187_23520 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CD187_23520 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CD187_23520 (fadB)
00930 Caprolactam degradation
CD187_23520 (fadB)
Enzymes [BR:
cyo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CD187_23520 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CD187_23520 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CD187_23520 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CD187_23520 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AWV28976
LinkDB
All DBs
Position
4808287..4810476
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQPNLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKQDKLLNGAIAVLRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTSEARALVGIFLNDQFVK
AKAKKLTKNIEAPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYSGFERVDVVVEAVVENPKVKKAVLAETEDQVRP
DTVLASNTSTIPINELASALKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDNKGKP
KKEEDATVDDLLAEVSQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGALYEVPAGLRDKARHNEPYYPQVEPA
RPVGSLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgcccctggttcggtcaataaactcgacacggccaccgttgccagcctgggc
catgcgcttgatgtgctggaaaaacaaccgaatttaaaagggctgctgctgcgttctaac
aaagcagcctttattgttggtgccgatatcaccgaattcctttcactgttcctcgtgcct
gaagaacaactgagccagtggctgcattttgccaacagcgtctttaatcgcctcgaagat
ctgcctgttccgaccctgtcagcagtaaacggctacgcgctgggtggcggctgcgagtgt
gttctggcaaccgattatcgtctggcaacgccggacctgcgcattggcctgccggaaacc
aagctgggcattatgccgggctttggcggctccgtgcgtatgccacgtatgctgggtgcg
gacagcgcgctggaaattattgcggcaggtaaggatgttggtgctgagcaggcgctaaaa
atcggcctggtcgatggcgtagtgaagcaagacaaactgcttaatggcgcgatcgcagta
ttacgtcaggcgattaacggcgacctcgactggaaggccaaacgtcagccgaagctggag
ccgttgaaactcagcaaaattgaagcggctatgagctttaccatcgctaaaggcatggtg
gcacagacggcagggaagcattatcccgcgccgattaccgcggtaaaaaccattgaagca
gcggcccgttttggccgtgaagaagcgctgaatctggaaaataaaagctttgttccactg
gcgcacaccagtgaagcccgcgcgctggtagggatcttccttaacgatcagttcgtcaaa
gccaaagccaaaaagctcaccaaaaatattgaagcaccgaagcaagctgcggtgctgggc
gcgggcattatgggcggcggcatcgcttaccagtcagcctggaaaggcgtgccggttgtc
atgaaagatatcaacgacaaatcattaacgctgggcatgaccgaagcggccaagctgctg
aacaaacagcttgagcgcggcaaaattgacggtctgaaaatggcgggcgtgatttccact
attcatccaaccctcgactatagcggttttgagcgtgtggacgtggtggttgaagctgtc
gtggaaaacccgaaagtgaaaaaagcggtactggcagaaaccgaagatcaggtacgcccg
gacaccgtactggcttcaaatacctccaccatcccaatcaacgagctggccagcgcgctc
aagcgcccggaaaacttctgtgggatgcacttctttaacccagtacaccgcatgccactg
gttgaaattattcgcggcgagaaaagctcggatgaaaccatcgccaaagttgtcgcctgg
gcaagccagatgggcaaaaccccaattgtggtcaacgactgccccggtttcttcgtgaac
cgcgtgctgttcccgtattttgccggtttcagccagctgctgcgcgatggggcggatttc
cgcaaagtcgacaaagtcatggaaaaacagtttggctggccgatgggcccggcttatctg
ctggacgtggtgggaattgataccgcacatcacgcgcaggcagtgatgtccgcaggcttc
cctcagcgtatgcagaaagattatcgcgacgcgatagacgccctgtttgatgcgaaccgt
ttcggacagaaaaacggtcttggattctggcgttataaagaagacaacaagggcaagccg
aagaaagaagaggatgccaccgttgacgatctgctggcagaagtcagccagccgaaacgc
gacttcagtgatgaagagattatcgctcgcatgatgatcccaatggtcaacgaagtggtg
cgttgtctggaagaaggcattatcgccagcccggcagaagccgacatggcgctggtgtat
ggcctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gcgaagtatctcgatatggcccagcagtatcagcacctcggagcgctgtatgaagttccg
gctggtctgcgtgataaggcgcgccataacgaaccgtattatccccaggttgagcctgcc
cgcccggttggcagcctgaaaacggcttaa
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