Cysteiniphilum sp. QT6929: NYP54_09265
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Entry
NYP54_09265 CDS
T09052
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys03030
DNA replication
cys03410
Base excision repair
cys03420
Nucleotide excision repair
cys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYP54_09265 (polA)
03410 Base excision repair
NYP54_09265 (polA)
03420 Nucleotide excision repair
NYP54_09265 (polA)
03440 Homologous recombination
NYP54_09265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cys03032
]
NYP54_09265 (polA)
03400 DNA repair and recombination proteins [BR:
cys03400
]
NYP54_09265 (polA)
Enzymes [BR:
cys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYP54_09265 (polA)
DNA replication proteins [BR:
cys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NYP54_09265 (polA)
DNA repair and recombination proteins [BR:
cys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NYP54_09265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYP54_09265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
WHN65225
LinkDB
All DBs
Position
2129284..2132004
Genome browser
AA seq
906 aa
AA seq
DB search
MSNTQKIVLVDGSSYLFRAFHALPQLTNRQGEPTGAIFGVINMLKKLPKQLNTDHIAVVF
DAKGKNFRHDLYPQYKANRKAMADELRVQISPVHDMVQKLGFPLIVIDAVEADDVIGTLA
KRFAKEGHEVVISTGDKDMAQLVDGHITLMDTMKNEITDREKVIAKFGVTPEQIIDYLAL
MGDTSDNIPGVPKVGPKTAVKWLAEYQSLQGVMENADKISGKVGENLRESIDFLPLSYQL
ATIKCDLDLPYTVQDMLCVKPDVDYLKRAFTQYEFKGWLRELEHEANIVSDAQKTGVETI
DTQSTLNYQIILTEEDFNTFYTELVKAKVFAFDTETDSLDTFNVRLVGMSFALKPHHAVY
IPLQHDYDNAPTQLALDWVVNKVKPILEDDQVAKIAQNAKFDLKVLSTVGINVKGVKYDT
MLESYVLNSSATRHDMDSLAHHYLGVKTVSFEELAGKGKNQLTFNQIDIAKAGFYAAEDA
DITYRLHERIWSELETVDSLRELYIKEELPVSFVIDRMERIGVKVDADLLKAQSASLTAK
IFQLEKECIELAGETFNLSSPKQLREILYDKMGLPILKKTQGGQASTAEDALQELAEIYD
LPKLIMEHRHLVKLKTTYTDKLPLMINSKTSRVHTSYQQAVTSTGRLSSTEPNLQNIPIR
SSVGREIRKAFIAKKGYKILAADYSQVELRIMAHLSQDPNLLHAFQQGLDVHRATAAETL
GIKADDVTPEQRRQAKAVNFGLIYGMGAFGLAKQLGIPRGEAQEYIDIYFARYPGVKRYM
EDAKAYAMQHGFVETIFGRRLYLPEINSRNMAKKRAAERVAINAPMQGSAADIIKRAMIL
IDEWIIKENIDARMIMQVHDELVFEVKDDQVEKISKEIKQFMESAALLQVPLIVDVGVGD
NWDEAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacactcaaaaaatcgttcttgttgatggatcatcttatctttttcgtgctttt
cacgccttgccacaattaaccaatcgtcagggtgagccaacaggtgcgatctttggtgta
atcaatatgttaaagaaattacctaagcagctcaataccgatcatattgctgtggttttt
gatgctaagggtaagaattttagacatgatttatatcctcaatataaagccaatcgtaag
gcaatggcagatgagcttagagtgcaaatctcccctgtgcatgatatggtgcaaaagctt
ggctttccactgattgtcatcgatgcggttgaggctgatgatgttattgggacattggct
aagcgctttgctaaagaagggcatgaagtggttatctcaacgggtgataaagatatggca
caactggttgatgggcatatcaccttaatggatacgatgaaaaatgagattaccgatcgc
gagaaagtcattgctaaatttggagtcacccctgagcaaattattgattacttggcgttg
atgggggatacctcggacaatatccccggtgtgccaaaagtgggaccgaaaacagcagta
aagtggctagcagaatatcaaagcttacaaggtgttatggaaaatgccgataaaatatcg
ggtaaggttggtgagaatctaagagagagtattgactttctgccgctatcttatcaacta
gctaccattaaatgtgacttggatctaccatacaccgttcaagatatgctctgtgttaag
ccggatgttgattatctgaagagggcgtttacacaatatgaatttaaaggctggttgcgt
gagcttgagcatgaagcaaatattgtgtctgatgcgcaaaagactggagtggagactatt
gatactcaatcaactttaaactatcagattattttgacggaagaagatttcaataccttt
tatactgaattagtaaaagcgaaagtctttgcttttgatactgaaacagactcattagat
acctttaatgtgcgtcttgttggtatgtcatttgctttaaagccacatcacgcggtctat
attccactgcaacatgattatgacaatgcaccaacacaattagcactagattgggttgtt
aataaagtaaaaccgattttagaagatgatcaagtggctaaaattgcacaaaatgccaag
tttgatttaaaagttttaagcaccgttggtattaatgtcaaaggtgtcaaatatgacaca
atgcttgagtcttatgtgctaaatagctcggcaacacgccatgatatggattcattggct
caccattatctaggtgtcaaaacagtgagctttgaggagctagcaggtaagggcaaaaat
caactgacgtttaatcagatcgatatagctaaggctgggttttatgcggcggaggatgcg
gatatcacttatcgtttgcatgagcgtatttggagcgagttagagactgtagacagctta
cgtgagttatatatcaaagaagaattaccggtgagctttgtcatcgatcgcatggagcgt
atcggtgttaaagttgatgccgatttattaaaagcgcaaagcgcatcactcacggcaaaa
attttccagttagaaaaagagtgtattgaattagctggagagacatttaacttatcatct
cccaagcaattgcgtgagattctctatgataagatggggttgccaatcttgaaaaaaaca
caaggtgggcaggcttcaacggctgaagatgcacttcaggagttggcagagatttatgac
ttgcctaagcttattatggagcatcgccatttagtgaaattaaaaacaacctataccgat
aagctgccattgatgatcaatagtaaaacatcacgggtgcacacttcctatcagcaagca
gtaacaagcacagggcgtttgtcatcaactgagcctaatctgcaaaatatcccgatccgc
tcaagtgtggggcgtgagattagaaaggcatttattgctaagaagggttataagatttta
gcggcggattactcgcaagtggagttaagaatcatggcgcatttatcgcaagatcctaat
ttacttcacgcttttcagcaaggcttagatgtgcatcgggcaacagctgctgagacatta
gggattaaagcggatgacgtaacacctgagcaacgtcgtcaagccaaggcagttaacttt
ggcttaatctatggcatgggcgcatttggtttggcaaagcaattaggcattccacgcggc
gaagcacaagagtatattgatatctattttgcgcgttatcctggggttaagcgttatatg
gaagatgccaaagcctatgctatgcagcatggctttgttgagaccatttttggtaggcgt
ttatatttgccagagattaattcgcgtaatatggcaaaaaaacgtgcagcggaacgcgtg
gcaatcaatgcaccgatgcaaggatcagcggctgatattatcaagcgtgcgatgatttta
attgatgaatggattatcaaagagaatattgatgccagaatgattatgcaggtgcatgat
gagctggtatttgaagtcaaagatgatcaggtggaaaaaatcagtaaagaaataaagcaa
tttatggagtcagcggctttattgcaagtgccgcttattgttgatgttggcgttggcgat
aattgggatgaggcgcattaa
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