Cycloclasticus zancles: CYCME_0181
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Entry
CYCME_0181 CDS
T02780
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cza
Cycloclasticus zancles
Pathway
cza00540
Lipopolysaccharide biosynthesis
cza01100
Metabolic pathways
cza01250
Biosynthesis of nucleotide sugars
Module
cza_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CYCME_0181 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cza01005
]
CYCME_0181 (rfaD)
Enzymes [BR:
cza01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CYCME_0181 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cza01005
]
Core region
CYCME_0181 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AGS38523
UniProt:
S5TTZ4
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Position
179217..180176
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AA seq
319 aa
AA seq
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MIIVTGGAGFIGSNIVQGLNARGISDILVVDDLKDGTKFKNIVDGRIADYMDKDDFLDSV
LGGDLDGVKIEALFHQGACSSTTEWDGQFMMENNYEYSKTLYHFCQENKVPFIYASSASV
YGGGRVFKEDLSNEAPLNVYGYSKFLFDQYVRAQEALSPQEARSQVVGLRYFNVYGPREQ
HKGSMASVAFHLNNQLLEKGEIKLFAGCDGYADGEQVRDFVYVTDVVDVNLWFLDNPTVS
GIYNCGTGKSQPFNDVAKGVLDYHQKGSLSYIPFPDHLIGHYQSFTEADLTALRAAGCDV
RFKTVAEGVKCYMEWLNAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgtaacaggtggtgcagggtttattggcagcaatatagtgcaaggtttaaac
gctagaggtattagcgacatcttagtcgttgatgacttaaaagacggcacaaaatttaag
aacatcgtggatggccggattgccgactatatggataaagatgatttcttagatagtgta
ttaggcggggacctcgacggggttaagattgaagcgcttttccatcaaggcgcctgctca
tctacaactgagtgggatggtcagtttatgatggaaaacaattatgaatactcgaaaacc
ctttaccatttttgccaagaaaataaggtgccgtttatttatgcatccagtgcctcggtt
tatggcggtgggcgcgtttttaaggaagacttatccaacgaagcgccactgaatgtgtat
ggttattctaaattcttgtttgatcaatatgtcagagcacaagaagcattaagcccgcaa
gaggccagaagtcaagtagttggtctgcgttattttaatgtatatggcccccgtgaacag
cataaaggcagcatggcgagtgtagcgtttcacttaaataatcaactacttgaaaaaggt
gaaatcaaacttttcgctggttgtgatggttatgcagatggtgagcaagtacgtgacttt
gtttatgtgacggatgtggttgacgtgaatttatggtttttggataacccaacggtgtct
ggaatttataattgtggcacgggtaagagccaaccttttaatgatgtagcgaaaggcgta
ctggattatcaccaaaaaggcagcctaagttacattccttttcccgaccatttgattgga
cattatcaaagctttacagaggcagacttaacggcgttaagggcggccggttgtgatgtt
agattcaaaaccgtggctgaaggagtaaagtgttacatggaatggttaaacgccggttag
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