Cycloclasticus zancles: CYCME_1404
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Entry
CYCME_1404 CDS
T02780
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cza
Cycloclasticus zancles
Pathway
cza00521
Streptomycin biosynthesis
cza00523
Polyketide sugar unit biosynthesis
cza00541
O-Antigen nucleotide sugar biosynthesis
cza01100
Metabolic pathways
cza01110
Biosynthesis of secondary metabolites
cza01250
Biosynthesis of nucleotide sugars
Module
cza_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CYCME_1404 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CYCME_1404 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CYCME_1404 (rfbC)
Enzymes [BR:
cza01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CYCME_1404 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGS39732
UniProt:
S5TFV7
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Position
complement(1401809..1402384)
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AA seq
191 aa
AA seq
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MKFVKQCIPDIIVIEPSLHGDTRGYFMETFRQDLFEAAVGHTVNFVQDNESKSSEGVLRG
LHFQLAPHAQSKLVRVIEGSVLDVAVDIRIGSPNFGRYVTVELTAENNKQLFIPRGFAHG
FVVLSETATFSYKVDNYYSPESDRGIAFDDPLLNINWRLSNEQLVLSDKDTKQPNLTQLP
ECFNYSTNYYA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttaagcaatgtatccccgatataatcgttattgaaccgagtttacatggt
gacacacgtggttatttcatggaaacgtttcggcaggatctgtttgaagccgcggttggg
cacaccgttaattttgtacaagataatgaatccaaatcgtctgaaggtgtattaagaggt
ttgcactttcaattagctccacacgcacaaagcaaattagtacgagtaattgagggtagc
gtactggatgtagctgtagatattcgtataggaagccctaactttggaagatatgtaact
gttgagttaacagctgagaataacaaacaattgtttataccacgcggctttgctcatggt
tttgttgtgttaagtgaaaccgcgacattttcttacaaagtcgataattattactcacca
gagtctgaccgagggatagcctttgatgatccgctgttaaacatcaattggcgattatca
aatgagcaattggtgttgtctgataaagacaccaagcaaccaaatttaacacagttgcct
gaatgctttaattattcaacaaactattatgcctaa
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