Deinococcus aetherius: DAETH_01340
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Entry
DAETH_01340 CDS
T08646
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dah
Deinococcus aetherius
Brite
KEGG Orthology (KO) [BR:
dah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dah03009
]
DAETH_01340 (rimO)
Enzymes [BR:
dah01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DAETH_01340 (rimO)
Ribosome biogenesis [BR:
dah03009
]
Prokaryotic type
ribosomal protein modification factors
DAETH_01340 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BDP40165
LinkDB
All DBs
Position
complement(142114..143619)
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AA seq
501 aa
AA seq
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MSEGDLTLTIADGPVPGTANQTKKVGFISLGCPKALVDSERILTQLRAEGYEVAPSYEDA
HAVIVNTCGFITPAVEESLSAIGEALDATGRVIVTGCLGERPEKILERHPKVAAITGSEA
VDDVMGHVRELLPIETGAFTGLLPVAAPGMRPEREATRHGDVFAPSVKLTPRHYAYVKIA
EGCNHTCAFCIIPKLRGRQVSRDAGAVLYEAYRLIAGGTKELMIISQDTSAYGVDVRYRE
SEFQGGQIRAHLTDLAEKLGEMGAWVRMHYVYPYPHVEKIVELMAAGKILPYLDVPLQHA
SPRILRLMRRPGAGKQLDTIRRWREICPELVIRSTFIVGFPGETEEDFQELLTFLEEARL
DRVGAFPYSDVDEADANKLPDAVPEGVKQERLARFMEIAQRISAEKLAEKVGHVLDVIID
EFNDDEGDLPGTRLIGRTKGDAPGIDGQVYLYAGDFVGQVKIGDIVRARIEDSDEYDLYG
EVVERPEWRPNVPLLGHFGKH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaggggacctgaccttgaccattgcagatgggcccgtgcccggcacggcgaac
caaacgaagaaagtcggcttcatcagcctgggctgcccgaaagcccttgtcgacagcgaa
cgcatcctgacccaactgcgcgcggaagggtacgaggtcgcgcccagctacgaggacgcg
cacgctgtcatcgtcaacacctgcggcttcatcacgcccgccgtggaggagtcgctgagc
gccatcggcgaggcgctggacgccacgggcagggtgatcgtgacgggctgcctgggcgaa
cgccccgagaagattctggaacggcaccccaaggtcgcggcgatcaccgggtcagaggcg
gtggacgacgtgatgggccacgtgcgcgagctgctgcccatcgagacgggtgccttcacg
gggctgctgcccgttgccgcccccgggatgcgccccgagcgggaggcgacgcgccacggg
gacgtgttcgccccctccgtcaagctcacgccccgccactacgcctacgtgaagatcgcg
gaggggtgcaaccacacctgcgccttctgcatcatccccaagctgcgcgggcggcaggtc
tcgcgcgacgcgggcgccgtgctgtacgaggcttaccgattgatcgcgggcggcacgaag
gaactgatgatcatctcgcaggacacctcggcgtacggggtggacgtgcgttaccgcgag
agcgagttccagggcgggcagatccgcgcgcacctcaccgacctcgcggagaagctgggc
gagatgggcgcgtgggtgcggatgcactacgtctacccgtacccgcacgtggaaaagatc
gtggagttgatggcggcgggcaagattctcccctacctcgacgtgcccctccagcacgcc
tcgcccaggattctgcggctgatgcggcgacccggtgcggggaagcagctcgacaccatc
cgccgctggcgtgagatttgcccggagctggttatccgctcgactttcatcgtgggcttc
ccgggcgagacggaggaggacttccaggagttgctgaccttcctggaggaggcgaggctc
gaccgcgtgggcgccttcccctactccgatgtggacgaggcggacgccaacaagttgccg
gacgccgtgcccgagggggtcaagcaggaacggctcgcccgcttcatggagatcgcccag
cgcatcagcgccgagaagctggcggagaaggtggggcacgtcctcgacgtgatcatcgac
gagttcaacgacgacgagggcgacctgccgggcacgcgtctgattggccggaccaagggc
gacgcccccggcatcgacgggcaggtgtacctgtacgcgggtgacttcgtggggcaggtc
aaaatcggcgacatcgtgcgggcccgcatcgaggacagcgacgagtacgacctctacggc
gaggtggtcgagcggcccgagtggcgcccgaacgtgccgctgttggggcatttcggcaag
cactga
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