Desulfosarcina alkanivorans: DSCA_34820
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Entry
DSCA_34820 CDS
T06544
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dalk03009
]
DSCA_34820 (rimO)
Enzymes [BR:
dalk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DSCA_34820 (rimO)
Ribosome biogenesis [BR:
dalk03009
]
Prokaryotic type
ribosomal protein modification factors
DSCA_34820 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BBO69552
UniProt:
A0A5K7YIQ6
LinkDB
All DBs
Position
complement(3895320..3896657)
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AA seq
445 aa
AA seq
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MLNPMRLYIESLGCARNQVDSENMAGQLCQAGWSLTPDPADASVILVNTCSFVESAINES
IDTILELARFKKEGRCQRLVVAGCLPERFRDAIADSLPEVDQFIGTGAFTRIVDAVTGEL
AGGACLLPDPDLIPIGRTAARERVLSHTAYLKIAEGCSRHCTYCIIPRLRGRQKSRPIDG
ILGEARQLIAAGVKELNLVAQDTTCYGQDLDEPVRFDILLARLAGMDPNVWIRFLYGHPE
SISDDVLKTVAAHRNLCPYFDLPVQHAAAGVLKRMGRNYDRRRLLDLFARIRSTVPGAAI
RTTLIVGFPGETDADFQELMDFVERVRFDHLGVFTYSDAEDLPSHRLPGHVPEAVARSRH
DALMARQMEISADNLASMIGTTMPVLVEASSEPYLYEGRSIVQAPEVDGLTYIRTQEGGP
QIAIGEMATVKITDTLEYDLIGKVP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaaccccatgcgattatacattgaaagtctgggctgtgcccgcaatcaggtggac
agtgaaaacatggccgggcagctttgtcaggccggctggtcgctgaccccggatccggct
gacgcgtccgtcatcctcgtcaatacctgcagcttcgtggaatcggccatcaacgagtcc
attgacaccattctcgaattggcccgattcaaaaaagagggacgctgccagcggctggtc
gtggccggttgcctgccggaacggtttcgcgatgccattgccgattccctgcccgaggtg
gaccagttcatcggtaccggggcctttacccgcattgtcgatgccgtgaccggcgaactg
gccggcggggcctgcctgctgcccgatccggatctgattcccatcggccggaccgcggcc
cgggaacgggtgctgtcccatacggcctacctgaaaattgccgaaggatgcagccggcac
tgtacctattgtatcattccccggttgaggggccgccagaagagccgaccgatcgatggg
atcctgggcgaagcccgccagctgattgccgcgggggtcaaagagctgaatcttgtggcc
caggataccacctgctacggccaggatctggacgaaccggtgcgatttgatatcctgctg
gcgcggctggccgggatggacccgaacgtctggattcgctttttatacggtcacccggag
agcatctccgacgatgtcctcaagaccgttgccgcccaccgcaacctgtgtccctatttt
gatctgcccgtccagcatgccgcggccggtgtcctgaagcgaatgggacggaactacgat
cgccggcggctgctggatctgtttgctcggattcggtccacggttcccggggcggccatc
cgaaccaccctgatcgtcggctttcccggagaaaccgatgccgattttcaggaactgatg
gattttgtggagcgggttcgcttcgaccacctgggggtgtttacctattccgacgccgag
gacctgccctcccaccggctgcccggacatgtgcccgaagcggtggcccggtccaggcat
gatgccctcatggcccgacagatggagatatcggccgacaacctggcatccatgattgga
acgaccatgccggtgctggtcgaggcatcctccgaaccctacctttatgagggccggtcc
atcgtgcaggcacccgaagtggatggcctcacctatattcgaacgcaggagggcggccct
cagatagcgataggcgaaatggcaacggtcaaaataacggacaccctggaatacgacctc
atcgggaaggtgccatga
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