Dickeya aquatica: DAQ1742_03227
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Entry
DAQ1742_03227 CDS
T06021
Symbol
thiI
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase / Rhodanese-like domain required for thiamine synthesis
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
daq
Dickeya aquatica
Pathway
daq00730
Thiamine metabolism
daq01100
Metabolic pathways
daq01240
Biosynthesis of cofactors
daq04122
Sulfur relay system
Module
daq_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DAQ1742_03227 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DAQ1742_03227 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daq03016
]
DAQ1742_03227 (thiI)
Enzymes [BR:
daq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DAQ1742_03227 (thiI)
Transfer RNA biogenesis [BR:
daq03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DAQ1742_03227 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Diphthami_syn_2
tRNA_Me_trans
NAD_synthase
DUF5334
Motif
Other DBs
NCBI-ProteinID:
SLM64050
UniProt:
A0A375ADA6
LinkDB
All DBs
Position
complement(3221570..3223018)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDENQR
EVIRDALTRIPGIHHILDVEDCAYTDVHHIFEQVLATYRTQVEGKTFCVRVKRRGKHDFS
SQDVERYVGGGLNQHIESARVNLSAPQVTVHLEIDQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSSVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQTAHYLWNRFGSSHRVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASRIAERYGVEALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIRLARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EHEESQFDFAILDRVVEQARNIDIREIAEQTKQDVAEVETVGEFVVSDVLLDIRSPDEQD
DRPLVMDGVEVKSLPFYKLSTQFGDLDQSKTYLLYCERGVMSRLQALYLHEQGFSNVKIY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcggttg
cgctttataaaaattcttaccggtaatatccgtaacgttttaaaacactatgacgaaaca
ctggcggttgtccgtcattgggatcatatcgaggttcgcgccaaagatgaaaatcagcgt
gaagtgattcgtgatgcgctaacgcgtattcccggtattcatcatattctcgacgtagaa
gattgcgcatataccgatgttcaccatatttttgaacaggtgctggccacctaccgaact
caagttgaagggaagaccttttgcgtgcgggtaaaacgtcgcggcaagcatgatttcagt
tcgcaagatgtggagcgttatgtcggtggtggcttgaaccagcatatcgaaagtgcgcga
gtgaacctcagtgcgccacaggtcacggttcatctggaaattgatcaagaccgcttgctg
ttaattaaagggcgctacgaaggtattggcggcttcccgattgggacgcaagaagatgtg
ctgtcactgatttctggcgggtttgattccagtgtatccagttacatgctgatgcgccgc
ggctgccgggtacattactgtttcttcaatcttggcggtgctgcccatgagattggcgtg
cggcaaacggcgcactatctgtggaaccgctttggcagttcacaccgggtgcgctttgtc
gctatcgattttgagcccgtggtgggtgaaattctggaaaaagtcgatgacggccagatg
ggtgtggtacttaagcgcatgatggtgcgtgcggcttcgcgtattgccgagcgctacggt
gtagaagcgctggtgacgggtgaagcgttagggcaggtatcaagccagacgctgaccaat
ttacggctgattgataacgcatctgatacgctgattttacgcccgctgatttctcacgat
aaagaacacatcatccgtttagcccgtgagcttggtacggaagattttgccaaaaccatg
cccgaatactgtggcgtgatttctaaaagcccgacggtaaaagcggtgaaggctaaaatc
gagcatgaagagagtcagtttgattttgctattctcgaccgtgttgttgagcaggcgcgc
aatatcgacatccgtgagattgctgaacagaccaaacaggatgtggcagaagttgaaacg
gttggtgaatttgtcgtcagtgatgtgctgcttgatatccgctcacccgatgaacaggat
gatcgcccgttggtgatggatggtgtagaggtgaaatctttgccgttctataagctgagt
acccagtttggcgacctcgaccagagcaaaacctatctgctgtactgtgaacgtggggtg
atgagccgtttgcaggcgctctatctgcacgaacaaggttttagtaacgtgaagatctat
cgcccctaa
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