Dechloromonas aromatica: Daro_3248
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Entry
Daro_3248 CDS
T00259
Name
(GenBank) Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
dar
Dechloromonas aromatica
Pathway
dar00362
Benzoate degradation
dar00627
Aminobenzoate degradation
dar01100
Metabolic pathways
dar01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Daro_3248
00627 Aminobenzoate degradation
Daro_3248
00624 Polycyclic aromatic hydrocarbon degradation
Daro_3248
Enzymes [BR:
dar01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Daro_3248
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
AAZ47978
UniProt:
Q47B03
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All DBs
Position
complement(3498275..3499111)
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AA seq
278 aa
AA seq
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MGKIVGGFLVPHDPVMFVIPDAPAPDVAKRMWSAFETCAERLAALNATSVVIIGADHYFN
FGTGCLPQYLIGTGDVDGPLDVLPGLKRQVIPASEKLASFIAEHGHDNGFDWAVARAFTV
DHAVAIPDRLIVDPVRAKGQAIGTIPVYIAAGVDPFIKMKRAIELGGAIKAAVEAMPDDE
RVVVIGSGGISHWVGTPEMGKVNEAFDHEIMGYACAGDLAAMQALSDDYILENGGNGGME
IRQWAVAMGAMPGAKGEIIDYAPVREWVTGLGFVQLFA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgggaaaaattgtaggcggctttttggtgccgcatgacccggtcatgttcgtgattcct
gatgcgccggcgcccgatgtggcaaagcgcatgtggagcgcgttcgaaacctgtgccgaa
cgcctggctgcgttgaatgcaaccagcgtcgtaatcatcggggccgaccactatttcaat
tttggcaccggctgcctgccgcagtacctgatcggcaccggtgacgtcgatggtccgctc
gatgtcctgcccggcctgaagcgccaggtcattccggccagcgaaaaactggcgagtttc
attgccgagcatggtcacgacaacggtttcgactgggcggtagcacgtgccttcacggtc
gatcatgccgtggccattccggatcgcctgattgtcgatccggtacgcgccaaggggcag
gctatcggcaccattccagtctatatcgcggccggcgtcgatccgttcatcaagatgaag
cgggccatcgaactcggtggcgccatcaaggcggctgtcgaggccatgcccgatgacgag
cgcgtggtcgtgatcggcagcggcggcatcagccactgggtgggtacgcccgagatgggc
aaggtcaacgaggctttcgaccacgaaatcatgggctatgcctgtgccggtgatctggca
gccatgcaggcattgagcgacgactacatcctcgaaaacggtggcaacggtggcatggaa
atccgccagtgggccgtggcgatgggcgcgatgcccggcgccaagggcgaaatcatcgac
tacgccccggtcagggaatgggtgaccggtctgggcttcgtccaattgtttgcttga
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