Candidatus Desulforudis audaxviator: Daud_1403
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Entry
Daud_1403 CDS
T00655
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dau
Candidatus Desulforudis audaxviator
Pathway
dau03030
DNA replication
dau03410
Base excision repair
dau03420
Nucleotide excision repair
dau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Daud_1403
03410 Base excision repair
Daud_1403
03420 Nucleotide excision repair
Daud_1403
03440 Homologous recombination
Daud_1403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dau03032
]
Daud_1403
03400 DNA repair and recombination proteins [BR:
dau03400
]
Daud_1403
Enzymes [BR:
dau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Daud_1403
DNA replication proteins [BR:
dau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Daud_1403
DNA repair and recombination proteins [BR:
dau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Daud_1403
NER (nucleotide excision repair)
GGR (global genome repair) factors
Daud_1403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACA59912
UniProt:
B1I4C0
LinkDB
All DBs
Position
1487213..1489849
Genome browser
AA seq
878 aa
AA seq
DB search
MAKFLVIDGNSLLHRAYHAIPPLTTSGGLPTNAVYGFTNMLLRVITEEQPDMIAVAFDKG
RITFRHDTFQEYKAQRPPMPDDLRPQLPILKDVLGALRISIHEAEGYEADDIIGTLVRVA
SENGHDSLILTGDKDILQLVGPHTQALLTRKGITELERYDMAKTRERFGITPAQLADLKG
LVGDPSDNIPGVPGIGPKIAARLLADHGRLESVLENLDGLPPRVRQQLENFGDQARMSKK
LATIDTGVPGLGKEDLKVWPGPDKPALLEIFNKLEFRSLVRRITEAPVTGGVPAGKPVEA
FSPDYRLLDGPDHLETLLDQARRAGAVAVAYARGRSGIEALGFSVEAGNYLLPLGAADLE
ILAGVRRLFADAAVAKHMHNAKDFLRWAPDFDLANICFDSMVAAYLVNPLAANQQLEDVV
HQYLNLVLVPDGPAAPATAADCIRRLYPVLRAELRGYELDYLFDRVELPLTRVLADMELA
GVAVDRDQLEALSEEFGTRAGELAARICTLAGEDFNLNSPRQLGYILFEKLGLPAGKKTK
TGYSTDAGVLLDLAEKHEIAALLLEYRQLIKLKTTYADGLAALVDPATGRLHTTLHQTVT
NTGRLSSAEPNLQNIPIRMEEGRRIRKVFIPRDPARVLLTADYSQIELRILAHLSGDPAL
ITAFRDEQDIHARTAAEVFGVPLEMVTPEMRSRAKAVNFGIIYGISDFGLARDLKVTRAE
AREYIQRYFARLPGVKEYIDTAIRSARERGYVTTALNRRRPLPELFSANHTVRSFGERAA
VNTPIQGTAADIIKLAMVKIHARMRERNLKTLMILQVHDELLFDVPAEEVCTVAPLVKAE
METVLPLNVPLTVDLKIGHNWYEVRKMDEVTQCLNFLK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtttcttgttattgatgggaatagccttttgcaccgggcctaccacgctatt
ccaccgcttactacctccggcggcctgcccaccaacgccgtgtatggtttcaccaacatg
cttttgcgggtcatcaccgaggagcagccggatatgatcgcggtggccttcgataagggc
cggatcacttttcgccacgacaccttccaggaatacaaggcgcagcgtcccccgatgccg
gacgatttgcgcccccagttacccatactcaaggacgtgctcggggccttgcggatctcg
atccacgaagccgagggttacgaggccgacgacatcatcggcaccctggtccgagtggcc
agcgagaacgggcacgactccctgatcctgaccggggacaaagacatcctgcagctggtc
ggaccccacacccaggccctgcttacccgcaagggcatcacggagctggaacggtacgat
atggccaagacgcgggaacgcttcgggatcactccggcacagttggccgatctgaagggc
ttggtcggcgacccttccgacaatatccccggtgtgccgggcatcggcccaaagatagcc
gcgagactgctcgctgaccacggccggctggagtcggtgttggaaaacctggacgggctc
cccccccgcgtccggcagcaactggagaacttcggcgaccaggcccggatgtccaaaaag
ctggcgactattgacaccggggtccccggactgggaaaagaagacctcaaggtctggccg
ggcccggacaagccggccttgctggagattttcaacaagctggagttccggagcctggtg
cgccgaatcaccgaggcccccgtcaccggcggtgttcccgccgggaagccggtggaggcg
ttcagccccgactatcggctcctggacggacccgaccacctggagaccctgctcgatcag
gcccgccgggccggcgcggtggctgtcgcctacgcacgcggccgaagcggcatcgaggca
ctgggcttcagcgtggaagcaggaaactaccttttgcctttgggcgcagccgacctggag
atcctggcgggcgtgcgcaggctcttcgccgacgcggcggtggccaagcacatgcacaac
gccaaggacttcttgcgctgggccccggattttgatctcgcaaatatctgctttgacagt
atggtggccgcttacctggtaaaccctctggcggccaaccaacaactggaggatgtggtc
caccagtatctgaacctggtgttggtccctgacggtcccgccgccccggcgaccgccgcg
gactgcatccggaggctttatccggttctgcgggccgagttgcgcgggtatgaactcgat
tacctctttgaccgggtcgaactgccgctgacccgggtgctggcggacatggaactggcc
ggtgtggccgtggaccgggaccagctcgaggcgctgtcggaggagttcggtacccgggcc
ggggaactcgccgcccggatttgcaccctggccggggaggacttcaatctcaattccccc
cgccagttgggctacatcctgtttgaaaagttggggcttccggccggcaagaaaaccaag
accggctactccaccgacgccggagtgctgctggacctggctgaaaagcatgaaatcgcc
gccctgctcttggagtaccgccagctgatcaagcttaaaaccacctacgccgacggactg
gccgccctggtggaccccgcgactgggcggctgcataccaccctacaccagacggtgacc
aacacgggaagattgtcgtcggccgagccgaaccttcagaacatcccaatccggatggag
gagggccggcggatccgcaaggtgttcatcccgcgcgacccggcccgcgtgctcctgacc
gcggactattcccagatcgagctgcgcattctggctcacctttcgggggacccggcactg
atcaccgctttccgggatgaacaggacatccacgcccggacggccgccgaggtcttcggc
gtgccgctggagatggtcaccccggagatgcgaagccgggccaaagcggtcaatttcggc
atcatctacgggatcagcgatttcgggctggcccgggatctaaaggtgacccgggcggaa
gccagggagtacatccagaggtatttcgcccgcctgcccggggtaaaggaatacatagac
accgcaatccgttcggcccgggagcgcggctacgtgaccacggccttgaaccgccgccgg
cctcttcccgagttgttcagcgccaaccacaccgtgcggagcttcggagaacgggccgcg
gtcaacacgccgattcagggcaccgcggccgacatcatcaagctggccatggtgaagatc
cacgcccgaatgcgggagcggaacctgaaaacgctgatgattttgcaggtacacgacgaa
ctgcttttcgacgtgccggcggaggaagtgtgtacggtggccccgctcgtcaaagccgaa
atggaaaccgtgctgccgctgaacgtgcccctgactgttgatctgaaaatcggacacaac
tggtatgaagtacggaaaatggacgaggtgacccaatgcctgaacttcctgaagtag
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