Drosophila arizonae: 108615814
Help
Entry
108615814 CDS
T05886
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
daz
Drosophila arizonae
Pathway
daz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108615814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daz03021
]
108615814
Enzymes [BR:
daz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108615814
Transcription machinery [BR:
daz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108615814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
108615814
NCBI-ProteinID:
XP_017866097
LinkDB
All DBs
Position
5
AA seq
1649 aa
AA seq
DB search
MGARRPPEVHMFPSDLEFAVFTPEEIRKLSVVKIITGLTFDALGHPIPGGLYDIRLGSYG
RCMDPCGTCLKMQDCPGHMGHIELGSLVYNPFFIKLVQRLLCIFCLHCHKLQMRDHESEI
IMLQLRLIDAGYIIEAQELELFKSEVVCQNTDEMVKLDNGDAVHPRIAAVQEMLAKNVSN
ASNATKTSCSLRTAITHAALQRGSSKKCRHCNKSMRFVRYLHRRLVYYVTIADMKERIGD
VPESSGQNKVIFADECRRYLRKIYENYPEFLKLLVPVLNLNSSESSPSEDYSPVDIFFMD
TIPVTPPRARPMNVINDMMKGNPQTDIYVNIIENNHVLNVILKFMKGQQDKLNDAARAAY
QNMRGASGHEKLYNAWLSLQSSVDVLLDVNMSRDIKSAEGLKQVLEKKEGLIRKHMMGKR
VNYAARTVITPDPNIDVDEIGIPDIFARKLSYPVPVTEWNVIELRKMVMNGPDVHPGANY
IQDSKGLTTYIPADNAAKRASMAKLLLSNPKDGVKIVHRHVLNGDVLLLNRQPSLHKPSI
MAHKARILHGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNVASNYLVP
KDGTPLGGLIQDQVISGVKLSIRGRFFNREDYQQLVFQGLSHLKGNVKLLPPAILKPAIL
WSGKQVLSTIIINLIPDGYERINLDSFAKIGGKNWNVARSRKPLCGSTPQEQELSESQVQ
IRNGELLVGVLDKQQYGATTFGLIHCMYELYGGDVSTRLLTAFTKVFTFFLQLEGFTLGV
KDILVTEEADRKRRKIIHECRDVGNSAVAAALELDDVPPHDELAEQMEAAYVKDAKFRVL
LDRKYKSMLDGYTNDINKTCLPGGLISKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIE
LEGKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAV
KTSRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKAKFFNGKFCADF
LTQNAKAVLRPSQLQLMKDEECLAKVKRHEKHIKSWQKKKPAKLYAAFTHFSKELRNDVE
VDRPNEINAKTGRRRFDEGLLKLWKKADAEDKALYRKKYARCPDPTVAVYKQDNYYGSVS
ERTRQLIEDYAAKHPAQKHIISDIMHMKSIKALASPGEPVGLIAAQSIGEPSTQMTLNTF
HFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKPGQQLNAEKLRISLNCVTLASL
LESVHVNTSLTLEPERAYVYDLHFKFLPREMYKEDFCVRPKRIIKYMHQTFFKQLIRAIL
KVSNAKKTSKIVVVDEKKEGGNRQDEDNDQELDVADDVGPQKVADNDDDSSDDGGDDDAT
GIKLKQRKTDENDYDDPDDVEEIIDANDDEDEHDEEDADGNEQANEENNEVDDKSVEKLL
SNQMVQDYTYDKDQHLWCRVKLNLSVRYQKPDLTSIIRELAAKSIVHQVPHIKRAIIYKG
NDDEQLLKTDGINIGEMFQHNKILDLNRLYSNDIHAIARTYGIEAATQVIVKEVSNVFKV
YGITVDRRHLSLIADYMTFDGTFQPLSRKGMEHSSSPLQQMSFESSLQFLRSAAGFGRPD
ELNSPSSRLMVGLPVRNGTGAFELLTRIC
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaagaagaccgccagaagtgcacatgtttccttcggacctggagttcgctgtg
ttcacacccgaggagatacggaaactgagcgtggttaaaataatcactggcctcacattt
gatgcactgggacatccaatacccggtggcctatacgacattcgattgggctcctatggc
cgctgcatggatccctgcggcacatgtctaaaaatgcaagattgtcccggccatatgggt
cacattgaactcggctcactggtctacaatccgttcttcattaaactggtgcagcgatta
ttatgcatcttctgtctgcactgtcacaagctgcaaatgagagatcatgaaagcgagatt
atcatgcttcagttgcgtctgattgacgctggctatattattgaagcgcaagaactggag
ttgtttaaatcagaagttgtttgccaaaacacagacgagatggtgaaactggacaacggc
gatgctgtgcatccgcgcatcgcagcggttcaagagatgttggccaagaatgtgagcaat
gccagcaatgctactaagacaagctgctccttgcgcacagccattacgcatgctgctctg
caacgtggctccagcaaaaagtgccgacactgcaacaagtccatgcgctttgttcgctac
ttgcatcgccgtcttgtctactatgtgaccattgctgatatgaaggaacgaataggcgat
gtgcccgaaagcagtggccagaacaaggttatatttgccgatgagtgccggcgctatctg
cgaaagatctatgaaaactatccggaatttcttaagctgctcgtgccggtgctaaacctg
aacagcagcgagtcaagccccagcgaagattactcgcccgttgatatatttttcatggat
acgataccagttacaccgccgcgtgcccgcccaatgaacgttattaacgacatgatgaag
gggaatccgcagacagacatctatgtaaacataattgagaacaatcatgtcctcaatgtg
atactcaaatttatgaaggggcagcaggacaaattgaatgacgcagctagagcagcctat
caaaacatgcgcggcgctagcggacatgagaagctctataatgcatggctgtcgttgcag
agctcggtggatgtgttgctcgacgtcaacatgtcgcgcgacatcaagtccgccgagggc
cttaaacaagtgctggaaaagaaggagggtctcatacgtaagcatatgatgggcaagcgt
gtcaattacgccgcgcgtaccgtcatcacacccgaccccaatatcgatgtggatgagatc
ggtataccggacatatttgcgcgcaagctctcctatccggtgccggtcaccgaatggaat
gtcattgagttgcgaaaaatggtgatgaatggaccagatgtgcatccgggcgccaactac
atacaagacagcaaaggcttgaccacctacatacccgccgacaatgcggccaagcgcgcc
agtatggctaaactgttgctgtccaatccgaaggatggcgttaaaattgtccatcgccat
gttctaaatggagacgtgctgctgctcaatcgtcagccttcgctgcacaagccctcaatt
atggcgcacaaggcccgcatattgcatggcgaaaagacctttcgccttcactactccaac
tgcaaggcctacaatgctgatttcgatggtgacgagatgaatgcgcactatccccaaagc
gaagtagcacgcgccgaagcctacaaccttgtgaacgtggccagcaactacctggtaccc
aaggacggcactccactgggaggccttattcaggatcaggtcatttcgggcgtgaaactg
tccatacgcggtcgcttcttcaatcgcgaagattatcagcagttggtattccagggcctg
tcgcatctcaagggcaatgtcaagttactgccaccggctatactgaagcccgcaatattg
tggtctggaaagcaagtactttcaactataataattaatttgataccggatggatatgag
cgcatcaacttggattcctttgccaaaatcggcggcaagaactggaatgtggccaggtcg
cgtaagcctctgtgtggctcaactccccaggagcaagagttgagtgagagccaggtgcaa
atacgtaacggcgagcttcttgtgggcgtgctcgacaagcagcagtacggcgcaaccacc
tttggtctgatccactgcatgtacgagctgtatggcggtgatgtgtccacgcgtctgctc
accgccttcacaaaggtattcaccttctttctgcagctcgagggtttcacgttgggcgtc
aaagatatattggtaaccgaagaggcagaccgcaagcgccgcaagatcattcacgagtgc
cgcgatgtgggcaatagcgctgttgctgctgctctggagttggacgatgtgccgccacac
gatgagctggccgaacaaatggaggctgcctatgttaaggatgcaaagttccgagttctg
ctcgatcgcaaatacaaatctatgttagatggctacacaaatgacattaacaaaacttgt
ctgcctggtgggctcatcagcaagtttccatcaaacaatctgcaactgatggttctatcg
ggcgcgaaaggatccatggttaacaccatgcaaatctcttgcctgctaggtcaaattgag
ctggaaggtaaacgacctccgttgatgatatctggcaaatctctgcccagttttacgtca
tttgagacatccccgaaatcgggcggctttattgatggtcgcttcatgacaggaatacag
ccgcaggactttttctttcactgcatggctggtcgtgaaggtctcatcgatacagctgtg
aaaacatcccgttccggttatctgcagcgctgtttaatcaagcacttggaggggttgagc
gtacattatgatctgactgtgcgcgatagtgacaatagtgtggtgcagtttctttacggc
gaggatggtctggacatactaaaggccaagttctttaacggaaagttctgcgctgacttc
cttacacaaaacgctaaggccgttttgcggcccagccagctgcagctgatgaaggatgaa
gagtgcctcgccaaagtgaagcgccacgagaagcacataaagagctggcagaagaagaag
ccagccaaattgtatgcggcattcacacacttttcgaaggagcttcgtaacgatgtggaa
gttgaccgacccaatgagataaatgccaagacgggacgcaggcggtttgatgaggggctg
ctcaagctgtggaagaaggcagatgctgaagacaaggcattgtatcgcaagaagtatgca
cgctgtcccgatcctaccgttgccgtatacaaacaagacaattactatggttcagtttcg
gagcgcacacgtcaattaatcgaggactatgcagccaagcatccagcacagaagcatatc
atttctgacattatgcacatgaagagcattaaggcgctagcgtcgcctggcgaaccagtg
ggtctgattgcagctcagtcgattggcgagccgtccacccagatgacattgaatactttc
cattttgctggccgtggtgaaatgaacgtcactctgggtataccgcgccttcgcgaaatt
ctcatgttggcgtcttcaaatatcaagaccccttcaatggatataccaatcaaaccggga
cagcaactaaatgcggagaagctgcgcatttcgctcaactgtgtgactctagccagtctg
ctggaatccgtgcacgttaacacaagcctgaccctggaacccgaacgagcatatgtctac
gacttgcactttaaattcctccctcgcgagatgtacaaggaggatttctgcgtgaggcct
aagcgtattatcaaatacatgcatcagacgttcttcaagcagcttattcgtgccattcta
aaggtgtccaatgccaagaagacttcaaaaatcgtcgtggtagatgagaaaaaggagggt
ggcaacagacaggacgaagacaatgatcaagaattggatgttgctgatgatgttggtcca
caaaaagtagcagacaatgatgacgactcctcagatgatggcggtgacgatgatgcaact
ggcattaagcttaagcagcgtaagaccgacgaaaatgactatgacgatccggatgatgtt
gaagaaattatagatgccaatgatgacgaagacgagcacgatgaagaggatgcagacgga
aatgaacaggcaaacgaagaaaataatgaagtggatgacaagtcggtggaaaagctactg
agcaaccaaatggtgcaggattacacctacgacaaagatcagcatctttggtgccgagtg
aagcttaatctcagcgtgcgttaccagaagcctgatctgacatctattatacgcgaattg
gccgctaagagtattgtacatcaagtgccgcatataaagcgcgctataatctacaagggc
aatgacgatgagcaactgttgaaaacagatggaatcaacattggtgaaatgttccagcac
aacaaaatcctggatctgaatcgtttgtactctaacgatattcatgctatagcacgtaca
tatggcatagaagctgcgacccaggtcattgtcaaggaagtcagcaatgtgttcaaagtt
tacggaattaccgtggatcgcaggcatttgtcactgattgccgactacatgacctttgat
ggcactttccagccgctctcacgcaaaggcatggaacactcttcttcgccgctacagcaa
atgtccttcgaatcgagcttgcagtttctgcgcagcgcagctggctttggtcgccctgac
gagctaaattcaccatcaagtcgtctaatggtgggcttacctgtgcgaaacggcactggt
gcttttgaattgttaaccagaatatgctaa
DBGET
integrated database retrieval system
