Desulfomarina profundi: DGMP_00650
Help
Entry
DGMP_00650 CDS
T07650
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dbk
Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dbk03009
]
DGMP_00650 (rimO)
Enzymes [BR:
dbk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DGMP_00650 (rimO)
Ribosome biogenesis [BR:
dbk03009
]
Prokaryotic type
ribosomal protein modification factors
DGMP_00650 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BCL59372
UniProt:
A0A8D5FT42
LinkDB
All DBs
Position
66535..67890
Genome browser
AA seq
451 aa
AA seq
DB search
MPSFNLISLGCAKNLVDSEIMLGCLTAGGWDFAESPEESDLLLLNTCGFIEPAVEEAIEE
ILELVKIKAQFPEKKLVVVGCLVQRYREKLATSLPEVDLFIGTEGAAKIADLVAPLFDGR
ESPPVVLLERMIMNSSLPRLISTPGARAWLKITEGCDNRCAYCMIPSIRGNLRSRTVEDL
VAEAQNLERRGIKELSLIAQDSTAYGNDLGQGTNLVQLVRELLLHTSVPWLRLLYLYPSG
ITDELLELISANPRVVPYLDIPFQHVNDRILKNMNRRYGRNELHLILGKIRKEIPDIAIR
TTFLVGFPGETEKEFMEIESFLREEMIDHVGVFSYANEEGCPSEKYDGQLSQDEKKRRCD
HILALQADLSRDIQQKYVGRVEPVLVEGVSRETELLLEGRTRYQAPEVDGCVYINEGEAN
AGDIVHVRISSAQVYDLVGGIVGGDDTVSDF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttttaatttgatcagtcttggatgtgcaaaaaatctggtagattcagaaatt
atgcttggctgcctgaccgcaggtggttgggattttgctgaatcaccagaagagagtgat
ctgctgctacttaatacctgtggatttattgaaccggctgttgaggaggcaattgaagaa
attctggaactggtaaagatcaaggcacagtttcctgaaaagaagctggtagtggtgggg
tgtctcgttcagcgttatagggaaaaactggcaacaagcctgccggaagttgaccttttt
attggtacggaaggcgcagctaagatagcagatcttgttgcaccactttttgacggaaga
gaatctcctccggttgttttgctggaacggatgattatgaacagttctctaccccgtctt
atttccactccgggagccagggcctggttaaaaataaccgaaggatgtgacaatagatgc
gcctattgtatgatcccatcgattcgcggtaaccttcggagtcggacggtagaagatctc
gtggcggaagcacagaatcttgagcggcggggaataaaagaactgtcccttattgcgcag
gattctaccgcgtatggtaatgacctggggcaggggacgaatctggtgcagcttgtccgg
gagctgcttttgcatacatctgttccctggttgcgtcttctctatctttatccttccgga
atcacggatgaacttcttgagttgatctcagcaaatcccagggtggttccctacctcgat
atcccgtttcagcatgtgaacgatagaatattgaagaacatgaatagaagatatggcagg
aatgagctgcatctcattctgggaaaaataagaaaggagattccggatattgccatcaga
accacttttcttgttggttttcccggagagacggaaaaggaatttatggagattgaatct
tttctgagggaagaaatgatcgatcatgtgggtgtgttcagctatgcaaacgaagaggga
tgtccttcggaaaaatatgatgggcagctgtcccaggatgaaaagaagagaagatgtgat
cacattcttgcactgcaggctgatctttcaagggatatacagcagaaatatgtgggcagg
gttgagccggttttggtggaaggagtcagtcgggaaactgaattacttctggaaggcagg
acaagataccaggccccggaagtagacggctgcgtctatattaacgagggagaggcaaat
gccggcgatattgtgcatgtcaggatcagcagtgctcaggtatatgatcttgtgggaggg
atcgtcggaggagatgatacggtctctgacttctga
DBGET
integrated database retrieval system
