Dermochelys coriacea (leatherback sea turtle): 119841999
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Entry
119841999 CDS
T09064
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc00531
Glycosaminoglycan degradation
dcc01100
Metabolic pathways
dcc04142
Lysosome
Module
dcc_M00076
Dermatan sulfate degradation
dcc_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
119841999 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119841999 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
dcc02042
]
119841999 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119841999 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dcc00537
]
119841999 (SPAM1)
Enzymes [BR:
dcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
119841999 (SPAM1)
Bacterial toxins [BR:
dcc02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
119841999 (SPAM1)
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Enzymes
119841999 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dcc00537
]
Enzymes
119841999 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
119841999
NCBI-ProteinID:
XP_038225805
LinkDB
All DBs
Position
1:311805438..311816020
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AA seq
577 aa
AA seq
DB search
MALYIRSHSLTEMETLRQVQSFGSFVASNRASWLLFIITLVTYCSSLHIRARPLIPNSPF
LSIWNAPTELCTEKTGVQLDLRTFHLVGSTLKTSTEQSITIFYADRLGSYPYIDENTGET
FNGGIPQLCSMEHHLKKASDDINFYIPSDEQVGLAVIDWENWRPLWIRNWGSKDIYRQES
VEFVQQKDLSISETQARTLAKMEFEAAAKSFMLQSLKLGISMKPNQLWGYYLYPDCYNYD
YNQNPHNYTGSCLDIEIARNNELNWLWEESTALYPSVYLETALRSSKNAPLFVRNRVQEA
IRVSNVSNSTCPLPIFVYTRPVFTDFNQEYLSQDDLVNTIGESAALGVSGIVIWGDLNLT
LSVNTCRTLDSYLRHTLNPYIINVTMAAKICSQALCQDSGACARKNWNSSDYLHLNPENF
VIQMSKNGKYAIKGQPSFQDLQRFIEKFYCRCYAGYNCELRVDINDIHYINACISEDICV
QVSLNSLSNVEASSNMSKFSFTPQRNITLPAHNATKGFQQTIWNNTFNVSTTGHINAPIN
SSGDLKITDTHSFSGSSSDEMKILDVICLILILRNLI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtacatacggagccattcactaactgaaatggaaaccctaaggcaagtccaa
agctttggtagctttgttgcctctaacagagcatcctggctgctgttcatcattactcta
gttacttactgttcatctttgcatataagagcccgtcctctcatccccaattctcctttc
ctctccatctggaatgcccctacagagctttgcactgagaagactggagtgcagctggat
ttgagaaccttccacttggtaggaagcacactgaagacatccactgagcagagtattact
atattctatgcagacaggctcggcagttatccttacatagatgagaacacaggtgagaca
tttaatggcgggatcccccaactgtgttccatggagcatcatttaaagaaagccagtgat
gacattaatttttacatcccttcagatgaacaggttggcttggctgtcatcgactgggaa
aactggaggccactatggatacggaactggggatcgaaagacatttacagacaggagtct
gttgagtttgttcagcaaaaagatttaagcatatcagaaacccaagccaggactttagcc
aaaatggaatttgaagctgcagcaaaatcatttatgttgcagtctttaaaactgggaata
tcaatgaagccgaatcaattgtggggatattacctttaccctgactgctataactatgat
tacaaccaaaatccccacaattatacaggaagctgtttagatattgaaatagcaagaaat
aatgagcttaattggttgtgggaggaaagcacagcactttacccatctgtctatctggaa
acggccttgagatcttccaaaaatgcaccactctttgttcgtaatagagttcaagaagcc
attagagtttctaatgtttccaattccacctgtccacttcccatttttgtatatacacgt
ccagtattcacagatttcaatcaggaatatctctctcaggatgaccttgtaaataccatt
ggagaatctgctgcattaggggtgtctggaattgtaatctggggagacctgaatttaaca
ctgagtgtgaacacttgcaggactctggacagctaccttaggcacactctgaacccttac
atcatcaatgtaaccatggcagccaaaatctgtagtcaggcattatgccaagactctggt
gcatgtgcacgaaagaattggaactccagtgactatcttcatctgaacccagagaatttt
gttattcagatgtcaaagaatgggaaatatgccataaaagggcagccatcatttcaggat
ctgcagcgatttatagaaaaattttattgccgctgttatgcaggctacaattgtgaactt
agagttgatataaatgacatccactacatcaatgcctgcatttcagaagatatttgtgtt
caagtatccttaaattcactttctaatgtagaagcctcttccaacatgagtaaattttca
tttaccccacagagaaacataacattacctgcacataatgcaacaaaaggttttcagcag
actatttggaacaacacattcaatgtatctactacaggacacatcaatgccccaattaac
agcagtggtgatttaaagataactgatactcatagcttcagtggctcatcttctgatgag
atgaagatactggatgtgatttgtttaattctaattttgagaaacctaatctaa
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