Dermochelys coriacea (leatherback sea turtle): 119844184
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Entry
119844184 CDS
T09064
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119844184 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
119844184
NCBI-ProteinID:
XP_038230603
LinkDB
All DBs
Position
16:19513455..19594643
Genome browser
AA seq
2532 aa
AA seq
DB search
MQQLLVQSLLLSLLPVLSRGLRCTQPAESCLNGGKCETYSNGTGVCLCNSAHVGDRCQLP
NPCLSSPCKNAGTCHPVIRGNAVDYTCSCHLGFTDRLCLTPEENACLNNPCRNGGTCDLL
TLTEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYVCKCTAGFHGASCKQDVN
ECNTSPPICKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTSDTT
YDCTCLPGFAGQNCEDNIDDCPGNNCKNGGTCVDGVNTYNCQCLPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGFNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACNQDIDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCIDKINEFHCECPTGFNGHLCQYDIDECASTPCKNG
AKCIDGPNTYTCECTEGFAGAHCEIDKNECDPDPCHYGTCRDGIAAFTCLCQPGYTGHLC
DININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCLDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCICPEGYHDPMCVLEVNEC
NSNPCIHGKCNDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEDVLAPCAASPCKN
GGECRESEDYESFSCVCPSGWQGQTCEIDINECVKSPCRNGATCQNADGGYRCNCKAGYT
GRNCDADIDDCKPNPCHNGGSCSDSIDAFFCDCLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCPPGFTGSYCEH
DINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCDVAANQQGVDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVTGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRQGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCDPAFTG
PDCQHPVSSPCNSNPCYNGGTCEYFSDAPPYYQCNCPANFNGLYCHILDFDFRGGVGQDI
TPPKIEEKCEIPVCAGFAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKVEGQCNPLYDQYCKDHFSDGHCDQGCNNAECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHHIKRSTENWSDMPSAVFNTIKTSLSSRVSERQRRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPQRNSQLYPMYVVV
AALVLLAFIGVGVVVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPSSYIGNLKPNVQGKKARKP
STKGLSCNSKDSKDIKARRKKSQDGKGCLLDSSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMTMGSSSRMAFDSMPPRLSHLPVSSPS
AVMSSAPMNFTVGGAASLTGQCDWLTRLQNGMVQNQYNPMRNNIQPGAHPQTQALQHGMM
TSLHNGMPTTTLSQMRSYQPMPNTRLASQPHLVQAQQLQQIQQQQNLQQQLQQQHHNTSS
NTNAHMSQNFLSNELNQADMQQVSSTTMAVHTVLPQETQILSTSLPSSLTQPMTTTQFLT
PPSQHSYSSPLDNTPNHQLQVPDHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSM
QSQIGHIPEAFK
NT seq
7599 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcttctggtgcagagcctcctgctgtcactgctgcccgtgctgagccgaggt
ttacgatgtacacagcctgccgaatcctgcctgaatggaggaaagtgtgaaacttactcc
aatgggactggggtatgcctatgcaacagtgcccacgtaggtgaccggtgccagctgcca
aacccctgcctcagctccccgtgcaagaacgccggcacctgccacccggtcatccgtggc
aatgctgtggattacacctgttcctgccacctgggcttcacagacaggctgtgcctgacg
cccgaggagaacgcctgcctcaacaacccctgccgcaacggggggacctgcgacctgctc
actctgactgaatacaagtgccggtgccctccggggtggtcaggtaagacctgccagcag
gcagatccctgtgcctccaacccctgtgccaacggagggcagtgtgttcctttcgaagcc
cattacgtctgcaagtgcacagcgggcttccatggggccagttgcaagcaggacgtgaac
gagtgcaacactagtcctcccatctgcaagaatggcgggagctgcaccaatgaggtcggg
acctaccagtgttcctgcaagccagcatacacgggccagaactgtgagcacctctatgtg
ccttgcaacccctcgccctgccagaacgggggcacttgccgtcagactagcgacaccacc
tatgactgcacatgtcttccaggttttgctggtcagaactgcgaggacaacattgatgac
tgtcctgggaataactgcaagaatggaggcacctgtgtggatggagttaacacctacaac
tgccagtgccttcctgagtggacaggtcagtattgcactgaagatgtcgatgagtgccag
ctcatgccgaatgcctgccagaatggaggaacgtgccacaacaaccacggtggcttcaac
tgcgtctgtgtcaacggctggactggcgaggactgcagtgagaacattgacgactgtgct
atggctgcctgcttccagggtgctacctgccacgaccgggtggcctctttctactgcgag
tgcccacatggccgcacaggcttgctgtgccacctggatgacgcctgcatcagtaacccc
tgcaacgaaggctctaactgcgacaccaaccctgtcaacggcaaagccatctgcacctgc
ccctcgggttacacgggcccagcctgtaaccaagacatagacgagtgctctctaggagcc
aatccttgtgagcatgctgggaaatgcatcaacacccaaggatccttccagtgccagtgt
ctccaggggtattcgggcccccgctgtgagatagatgtcaatgaatgcctctcgaatccg
tgccagaacgatgccacctgcctggatcagattggtgaattccagtgtatctgcatgcca
ggttacgagggagtttactgtgaaatcaacacagacgagtgtgccagcagcccctgcctg
cacaacgggaactgcatcgataagatcaacgagttccactgcgagtgccccacaggcttt
aatgggcacctgtgtcaatatgacatcgacgagtgcgccagcacgccatgcaagaacggg
gctaagtgcatagacggccccaacacctacacctgcgagtgcacagaaggatttgcaggt
gctcactgcgaaatcgacaaaaacgaatgtgatcctgacccgtgccactacgggacctgc
agagacggcattgctgccttcacctgtctctgccagcctggctacacgggccacctctgt
gacatcaacatcaacgagtgccagagccagccatgcaaaaatggagggacctgccaggac
aggaacaatgcctacaactgtctgtgcctcaaaggcaccacagggcctaactgtgaaatc
aacctggacgactgtgctagcaacccatgtgactatggcaagtgcctagacaagatcaat
ggctatgaatgtacctgcgagccaggatacacagggagaatgtgcaacatcaacatcgac
gagtgtgccagcaacccgtgccacaatggtggaacctgtaaggacggcatcaatggcttc
acgtgcatctgccccgagggttaccacgaccctatgtgtgtgctggaagtgaatgagtgt
aacagcaacccctgcatccatgggaaatgcaatgatggactcaatggctacaggtgtgat
tgtgacccaggctggagcgggacaaactgcgacatcaacaacaacgagtgtgaatcaaat
ccttgcatgaatggaggcacctgcaaggatatgactagcggatacatctgtacctgccgg
gagggtttcagtgggcccaactgccagaccaatatcaatgaatgtgcttccaacccttgc
ctgaatcagggaacctgcatagatgatgtagccggctacaaatgcaactgtctcctgcca
tatacaggggctacgtgtgaggacgtgctagctccgtgtgcggccagtccgtgtaagaat
ggtggcgagtgcagagagtcagaggactacgagagcttctcctgcgtctgcccctctggc
tggcaaggtcaaacgtgtgagattgacatcaacgaatgtgtgaaaagcccctgtcgaaac
ggcgccacgtgtcagaacgcagatgggggctaccgctgcaactgcaaagcaggctacacc
ggccgcaactgcgatgccgacatcgacgactgcaagccaaatccctgccataatggtggc
tcctgctctgacagcatcgacgccttcttctgtgactgcctggcaggcttccgggggccc
aaatgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaatggggccaactgc
acggattgtgtcaacagctacacgtgcacctgcccctctggcttcagtgggatccactgt
gagaacaacacacctgactgcacagaaagctcctgttttaatgggggaacctgtgtggac
ggcatcaataccttcacctgcgtatgcccaccgggcttcacgggcagctactgtgagcat
gacatcaacgaatgcgactccaagccgtgcttgaatgggggcacctgccaggacagctat
gggacctacaagtgcacctgcccgcagggctacaccggcctcaactgtcagaatctggtg
cgctggtgtgactcctctccctgcaaaaacggaggcaagtgctggcagaccaacaacctg
taccgctgtgagtgcaacagcgggtggacgggcctgtattgtgacgtccccagcgtatcc
tgtgatgtggctgcgaaccagcaaggtgtcgacgtggcgcacctgtgcaggaactccggc
ctctgcgtggatacaggcaacacgcacttctgccgctgccaggctggttacacgggcagc
tactgtgaggagcaggtggacgagtgctccccgaacccctgccagaatggagctacatgc
acggactacttgggaggctactcctgtgagtgtgttactggctatcacggagttaactgc
tcagaggagatcaatgagtgcctgtctcacccatgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcttgccccagagggactcaaggggtgcactgtgaaatc
aacgttgatgattgcagccctttctttgatcccgtcactctggggcccaagtgctttaac
aacggcaaatgcacagaccgagtgggcggctacagctgcatctgcccacccggcttcgtg
ggggagcgctgcgagggggacgtcaatgaatgtctgtccaacccctgtgacgcgcggggg
acccagaactgcgtgcagcgtgtcaacgattacaagtgcgagtgcaggcaggggtatgca
ggccgtcgctgtgataccgtggtggatggctgtaagggcaaaccctgcaggaacggtgga
acgtgtgcagttgctagcaacactggccggggcttcatctgtaaatgccccccgggtttt
gtcggcgccacttgtgaaaacgactcgcgcacctgtgggaacctgcactgcttgaatggc
ggcacctgcatctccatccacaagagctccaagtgcatgtgtgatcctgccttcacggga
ccagactgccagcaccccgtcagcagcccttgcaattcaaacccatgttacaatgggggc
acctgtgaatacttcagtgacgctcccccatattaccagtgcaattgccctgcaaatttc
aatggcctatactgccacatcctggattttgatttccggggaggcgtcggacaggacatc
accccacccaaaattgaagagaaatgtgagatacccgtttgcgcgggtttcgctggcaac
aagatctgtgatgggaagtgcaacaaccatgcctgcggctgggatggaggggactgttcc
ctcaacttcaacgacccctggaagaactgctcccagtcgctgcagtgctggaagtacttc
aacgacgggaagtgcgattcgcagtgcaacaatgctgggtgtctgtatgatggctttgac
tgccagaaggtggaagggcaatgcaatcctctgtatgaccagtactgtaaagatcacttt
tcagatggtcactgcgaccaggggtgtaacaatgctgagtgtgaatgggatggtctggac
tgtgccaacaacatgcctgagaagcttgcagatggcactttggtagtggtggtcctgata
accccagagaacctgaagaacaactccttcaacttcctccgagagctcagccgtgtcctt
cacaccaatgtggtcttcaaaaagaaccccaagggagagtacatgatcttcccatactac
ggcaatgaagaggagctgaaaaagcaccacatcaagaggtcgacagagaactggtcagac
atgcccagtgccgtcttcaacacaataaagacatccctctcatcgcgtgtcagtgaaagg
cagcggagagagctggatcagatggatatcagaggatccatcgtatacttggagattgac
aaccgccagtgtatccagtcctcctcgcaatgctttcagagtgcaactgatgtggcggct
ttcctgggtgccttggcctcacttggtaacctgaacatcccctacaaaatagaagccgtt
aaaagtgaaacagctgagccccagaggaactctcagttgtatcctatgtatgtggtggtg
gctgcacttgtcttgcttgctttcattggagtgggagtagtggtatctcgaaagcggcgc
agggagcatgggcagctctggttcccagaaggcttcaaagtgacagagtcaagcaagaaa
aagcgacgagaaccacttggggaggattccgttggactgaaacccttgaaaaatgcttct
gatggcaccttgatggatgacaaccagaatgaatggggtgatgaagaaaccttggacact
aagaagttcaggtttgaggagcaggcgatgctgccagacacggacgatcagacagatcac
aggcagtggactcaacagcacctagatgcagccgacctgcgcatctcttccatggcaccc
accccaccgcaaggtgaaattgatgcagattgtatggatgtcaacgttcgaggtcctgat
ggattcaccccactcatgattgcttcgtgcagtggaggaggactggagactggcaacagc
gaagaggaggaggatgctcccgctgtcatctcagatttcatttaccagggtgccagcttg
cacaaccagacagaccgaaccggcgagacagcactccacctggctgcaaggtattctcgc
tccgatgctgccaaacgcctgctggaggccagtgcagatgcaaacatccaggacaacatg
ggcaggacgcccctccatgcagctgtgtcagctgatgctcaaggagtcttccagatcctg
attaggaacagagcaactgatttggatgcccgcatgcacgatgggaccacgccgctgatc
ctggcagctcgcttggccgtggagggcatgctggaggatctgatcaattgccacgcagat
gtcaatgcagtggatgacctaggcaaatcggcattgcactgggcagctgctgtgaataac
gtagaagctgccatggtgctgctgaagaacggtgccaataaagacatgcagaacaataag
gaggagacaccattgttccttgcagccagagaagggagctacgaaactgccaaagtcctc
ctggatcactttgcgaaccgtgacataacagatcacatggaccggctcccgcgggacatt
gcgcaggaacgcatgcaccatgacattgtgcggctgctggacgagtataacctggtacgg
agccctccactgcataatggtccgctgggggcgcccaccctgtctcctccactttgctct
cccagcagttacatcggcaacctgaaacccaacgtccaggggaagaaagctaggaagcca
agtaccaagggcctgagctgcaatagcaaagattccaaagacatcaaagccaggaggaaa
aaatcacaggatgggaaagggtgccttctagatagctctagcgtgctgtcaccagtcgac
tccctggagtcaccccatgggtacctgtcggatgttgcttctcctccactgatgacctct
ccatttcagcagtccccttcgatgcctctgaatcacctgccaggcatgcctgatgcccac
atgagtatcaaccatcttaacatggcgggaaagcaggatatgacgatgggcagctccagc
aggatggccttcgattcaatgcccccgcgtctctctcaccttcccgtatccagccccagc
gcagtcatgagcagtgcaccgatgaatttcactgtaggcggagcggccagcctgaccggg
cagtgcgactggctaacgaggctgcagaatgggatggtccaaaaccaatataatccaatg
agaaacaacatccagcccggggctcacccgcaaacccaagcccttcagcatggcatgatg
acctccctgcacaacggcatgcccaccactaccttgtctcagatgaggagctaccagccc
atgcctaatacaaggttggcctcccagccacatctggtgcaggcccagcagttgcaacag
atccaacagcagcagaatttacagcagcagctgcaacagcagcatcacaacaccagctca
aacaccaacgcccacatgagccaaaatttcctcagtaatgagctaaaccaggcagacatg
cagcaggtgagcagcactaccatggcagtgcacactgttttgcctcaagagacccagatc
ctatcaacgtctctaccatcctccctcacacaacccatgaccaccacccagtttttaact
ccgccctctcaacacagttactcctcccccttagacaatacacccaatcaccagcttcag
gtgccagaccaccctttcttaacaccttccccggagtcaccggaccaatggtcaagctca
tctcctcattccaacatatctgattggtcagagggaatctccagccctcccacgagtatg
cagtcacagataggacatatcccagaagccttcaagtaa
DBGET
integrated database retrieval system
