Dermochelys coriacea (leatherback sea turtle): 119844560
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Entry
119844560 CDS
T09064
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcc02000
]
119844560 (SLC6A4)
Transporters [BR:
dcc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119844560 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF3439
Motif
Other DBs
NCBI-GeneID:
119844560
NCBI-ProteinID:
XP_038231493
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Position
17:complement(2712870..2751474)
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AA seq
678 aa
AA seq
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MKKSSSNENQPLTSKKELLDCTEGEDCKENGLLVKNPKSALQLVEDGNKVHSSQGDKGEA
GQISNGYSVVQNPVPCDGIGDGEDVQGMAPAATTTTTTTTSTTCGVEAQPQLLEPEERET
WSKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQ
YHRNGCISIWRKICPIFKGIGFTICIIAFYIASYYNTIMAWALYYLISSFTVELPWISCK
NAWNTGNCTNYFTNASITWTPHSISPAEEFYTRHVLQVQRSKGLDDLGGISWQLTLCLLL
IFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVVFYLKPDWQKLL
ATEVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFVSGFVIFT
VLGYMAEMRNEEVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFA
GLEGVITAVLDEFPYVWGKRREWFVLGLIIACFLGSLTTLTFGGAYVVKLFEEYATGPAV
LTVVFLESIAVAWFYGINQFCSDMKEMLGFTPGWYWRLCWVAISPIFLLFIICSFMSSPP
DLRLFDYNYPYWTTIVGYCIGTSSVICIPLYMAYRLIITPGTFKEVSDVFYLFKFIFDGM
YLPPHYPAVHKERWGNTA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcatccagcaatgagaaccagcctcttacttctaagaaagagctcttggat
tgtacagaaggtgaagattgcaaagagaatggactcctggtcaagaaccctaaatccgcc
ctgcagctggtagaggatgggaataaggtccactccagccagggagataaaggggaagca
ggtcagatctcaaatggctactcagtggttcagaacccagttccttgcgatggaatagga
gatggggaagatgtccagggtatggccccagcagccacaactaccaccaccaccaccact
tccaccacttgtggagtggaggctcaaccacagctgctggagccggaggaaagagagacc
tggagtaaaaaaatggactttcttctctctgtcattggctatgcagtagatctgggcaac
atatggcgatttccctatatatgctaccaaaatggaggaggagcgtttctcatcccgtac
acgatcatggccatctttggaggcatccccctcttttacatggaactagctctgggacaa
taccacaggaatggatgtatctcaatttggagaaaaatttgtcctattttcaaaggaatt
ggctttactatctgcataatagctttctacatagcctcttactacaataccatcatggct
tgggccctctactacctcatttcatccttcacggtggagctcccatggatcagctgcaaa
aatgcttggaacactggcaactgcaccaactacttcaccaatgccagcattacctggacc
ccacactccatctcccctgcagaagaattttatacccgccatgttctacaggtgcaaaga
tccaaagggctggatgatttgggaggcattagctggcaactgaccctctgcttattgttg
attttcactattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtagtg
tgggtgactgccacgttcccttacatcatactctttatcctgttagtacgaggggccaca
ttgcctggagcctggaggggggttgtcttctacctgaagcctgactggcagaaactcctg
gccactgaggtctgggtggatgctgcagctcagattttcttctctctaggtccaggtttt
ggggtcctactagcctttgccagctacaacaaattccacaacaactgctaccaggatgca
ctggttaccagtactgtgaactgcatgactagttttgtgtctggatttgtcattttcact
gtgcttggatatatggctgaaatgaggaatgaagaggtgtcggaggttgctaaagatact
gggcccagccttctcttcattacctacgcagaggccattgcaaacatgcctgcttcaact
ttttttgccatcatatttttcttgatgttactcactctgggattagacagcacgtttgca
ggactggagggggtgatcactgcagtgctggatgaatttccatatgtctggggcaagcgc
agggaatggtttgtccttggtctgatcattgcttgcttcctggggtcattaacaactctg
acatttggtggtgcatatgtagtgaagctgtttgaagaatatgctacaggccctgctgtc
ctaacagtggtgtttctggaatccattgcggtggcctggttctatggcatcaaccagttt
tgcagtgacatgaaggaaatgctgggcttcactccaggctggtactggcgactctgctgg
gtagcaatcagccccatcttccttttgttcatcatttgcagttttatgtccagccctcct
gatctacgactttttgattataactatccctattggaccactatagtgggttactgcata
ggaacctcctctgttatctgcattccactctacatggcttatcggttgataatcacccca
ggaacatttaaagaggtatctgatgtgttttatttgttcaagttcatttttgatgggatg
tacttgccaccccactacccagccgtacataaggagaggtggggaaatactgcatag
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