Dermochelys coriacea (leatherback sea turtle): 119853336
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Entry
119853336 CDS
T09064
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119853336 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119853336 (POLR1B)
Enzymes [BR:
dcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119853336 (POLR1B)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119853336 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
119853336
NCBI-ProteinID:
XP_038252221
LinkDB
All DBs
Position
3:complement(209069365..209103347)
Genome browser
AA seq
1138 aa
AA seq
DB search
MAAAAAAAKWRGLPERPSLAPLTAPGYGRPRERQRPALQELTRAHIESFNLAVGEGLHRA
VQAVPALEFAFKNERITLAVVGAVISPPMVPKGSICKELKVYPAECRGRRSTYRGKLTAD
ISWSVNGIPKGIIKQSLGYVPIMVKSKLCNLHSLPPRALIEHHEEEEEMGGYFIVNGIEK
VIRMLIMPRRNFPIAMIRPKWKSRGPGYTEYGISMHCVRDEHTAINMNLHYLENGTVMLN
FIFQKELFFLPLGFALKALAGFSDYQIFQELIKGREDNSFYKNCISQMLRMVMEEGCATQ
KQVLNYIGKCFRVKLNLPEWYPNEQAAEFLVDQCICIHLKTKTEKFYLLCLMTRKLFAFA
KEECMEENPDSLMNQEVLTPGQLYLMFLKERMEAWLLSVKAALDKRSQKTNITINSENMM
KLFSMGIDVTRPFEYLLATGNLRSKTGLGMLQDSGLCVVADKLNFIRYLSHFRCVHRGAA
FAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHITTVCEIVSQSAYTLSLPPLLCSL
GVTPVDGTPSQPYAECYPVTLDGSLVGWVEKDMAPRIADTLRHFKVMQEKKIPAWTEVVL
IPMTGKPSLYPGLFIFTTPCRMVRPVRNLAVGKEELIGTLEQVFMNIAVLEDEIVPGVTT
HQELFPHSMLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYKERSDNKLYRLQTP
QSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVSKASWERGFAHGSVYKTE
SIDLAEKIKQGDDSLVFGVKPGDSRVIQNLDADGLPHIGTILQYGDPYYSYLNLSTGESF
ITYYKSKESCVVDNIKVCSNDSGNGKFKSICITMRIPRNPTIGDKFASRHGQKGILSRLW
PVEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENS
ALEYFGKMLKAAGYNYYGTERMYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGA
RDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLL
SPLLEKPPPSWSTTRNRKYYCTVCNQSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVN
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcgaagtggcggggcctgcccgagcggcccagcctcgcg
cccctgacggcgccgggctacgggcggccccgcgagcggcagcgcccggccctgcaggag
ctgacccgggcccacatcgagtccttcaacctggccgtgggcgaggggctgcaccgggcc
gtgcaggctgttcctgctctggagtttgctttcaaaaatgaacgcatcactctggcagtt
gtgggtgctgtcatcagtcctcctatggtaccaaaagggagtatctgtaaagagctgaaa
gtatacccagcagaatgtagaggacgcagaagcacctatcgtgggaaactgactgctgac
atcagctggtcagtgaatggtattcctaaagggattattaaacaatccctgggatatgtt
ccaatcatggtgaaatctaaactttgcaatctacatagtcttcctcccagagctctgatt
gaacaccatgaggaagaagaggaaatgggaggctattttatagttaacggtatagaaaaa
gttatcagaatgctgattatgcctagacgaaacttccccattgcaatgataagacccaaa
tggaaaagccgaggccctggttacacagagtatggtatatcgatgcactgtgttagggat
gagcacactgctataaacatgaaccttcactacctggagaatggtacggtgatgctgaac
ttcatttttcagaaagagttgttcttcctcccactgggatttgcactgaaggcattagct
ggtttctcagattaccagatttttcaagagttgatcaaaggaagagaagacaactccttc
tataagaactgcatctctcagatgctgagaatggtaatggaggagggctgtgccacgcag
aagcaggtccttaactacattgggaaatgcttccgagtgaaactcaaccttcctgaatgg
tacccaaatgagcaagctgcagaattccttgtggatcagtgcatctgtatacacttgaaa
accaaaactgagaagttctacttgctttgtctgatgacccggaagctgtttgcttttgcc
aaagaagagtgcatggaggagaatccagatagccttatgaatcaggaggtgcttacccca
gggcagctttacctcatgttcttaaaggagaggatggaagcttggttgctttctgttaaa
gcagccttggacaaaagatctcaaaagaccaatataaccataaattcagaaaatatgatg
aagctattcagcatgggaattgatgttacaaggccatttgaatatctccttgctactggt
aacctgcgctctaaaacaggtctgggtatgctacaagattctggtctgtgtgtggtggca
gacaagctgaattttattcgttacctgtcccattttcgctgcgtacacagaggtgctgca
tttgccaagatgagaaccaccacagtgcgcaaactgctgccagaatcctggggcttcctg
tgccctgtgcacacccccgacggagagccctgtgggctgatgaaccatattacaactgtc
tgcgaaatagtgtcgcagtcagcctacaccttgtccctgccacctttgctctgctcctta
ggtgtcactccagttgatgggactccaagccaaccctatgcagagtgttacccagttaca
ctggatggctcgttagtgggctgggtagaaaaagatatggctcctaggattgcagatact
ctccggcactttaaggtaatgcaagaaaagaaaattccggcctggactgaggtagtcctt
attccaatgacaggaaaacctagcctgtatccaggattattcatttttactaccccttgc
aggatggttcggcctgtgagaaatttggccgtgggaaaggaagaattgattggtacgctg
gaacaggtcttcatgaacattgctgtccttgaggatgaaattgtgcctggcgtgaccact
caccaggagctctttcctcatagcatgctgagtgtggtagccaacttcattccgttctct
gatcacaaccagagtcccagaaacatgtaccaatgccagatgggcaagcaaactatgggc
tttccacttctgacttataaggaacgctcagataataaactgtaccgacttcagaccccg
caaagccccttggtgcggccatccatgtatgattactatgacatggacaactatccaatt
ggcaccaatgcaatcgttgctgtcatctcctacactggctatgacatggaagatgcaatg
attgtaagtaaggcttcgtgggagagaggatttgcacatggcagcgtttacaagacggag
agcatagatcttgctgaaaaaatcaaacaaggagatgacagtctggtgtttggagtcaag
cctggtgattcaagggttatacagaatctagacgctgacggactgccgcacattggaacc
atactgcagtatggggatccttactacagctacctgaacctcagtaccggggagagcttc
ataacctattacaagagtaaggaaagttgcgttgtggataatatcaaagtgtgcagcaat
gacagtggaaatggaaaatttaaaagtatttgcatcactatgagaatccctcgtaaccca
actattggggacaaatttgccagccgacatggacagaagggtattttgagcagactctgg
ccagttgaggacatgccatttacagagagtggaatggttccagatattctcttcaatcct
catggctttccatcccgaatgaccattggaatgctgattgagagtatggcagggaagtct
gcagcgttgcatggcctctgtcacgatgccacccccttcacgttttcagaggagaactct
gccttggaatactttggcaagatgttgaaggctgctggctataactactatggaacagag
aggatgtatagtggaatcagtggggtggaactggaggcagatatttttattggagttgtg
tactatcaacgcctgcgccacatggtctcggacaagttccaagtgaggacgacaggagcc
agagataaagtcaccaaccagcccatcggtgggaggaatgtccagggggggattcgcttt
ggagagatggaacgcgatgctttgttggctcacggcacgtccttcttgctgcatgaccgt
ctcttcaactgttctgatcggtctgtggcccatgtctgtgtcaagtgtggcagtttgctt
tctcctttgttggagaagcctccgccttcctggtccaccacacgcaataggaaatactac
tgtactgtgtgcaatcagagcgacacaatcgacactgtttccgtgccttatgtcttccgg
tattttgtggctgagttggcagccatgaacataaaagtgaaactcgacgtgaactaa
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