Daucus carota (carrot): 108193045
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Entry
108193045 CDS
T05350
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00906
Carotenoid biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108193045
Enzymes [BR:
dcr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
108193045
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
HI0933_like
Pyr_redox
Trp_halogenase
NAD_binding_8
Pyr_redox_3
FAD_binding_2
FAD_binding_3
GIDA
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
108193045
NCBI-ProteinID:
NP_001316089
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Position
6:complement(34273077..34275096)
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AA seq
508 aa
AA seq
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MKVMDTLLKTHNKLEFFNPIHGFPDKVGTLSCLKFRNQELRFGSRRSNVNWGKNGSVKAS
SSALLELVQETKKENLEFDLPLYDPSNGLVVDLAVVGGGPAGLAVAQQVSEAGLAVVSID
PSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSSAIVYIDDQTTKELGRPYGRVNRKQLKS
KMMQKCISNGVKFHQAKVVKVVHEEAKSLLICDDGVTIQAAVVLDATGFSRCLVQYDKPY
NPGYQVAYGIVAEVEEHPFDVNKMIFMDWRDSHLNGNTELKERNSKIPTFLYAMPFSSDR
IFLEETSLVARPGLAMGDIQERMVARLRHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVG
IGGTAGMVHPSTGYMVARTLAAAPVVANAIVQYLGGSKKGALGNELSAEVWKDLWPIERR
RQREFFCFGMDILLKLDLPGTRRFFSAFFDLEPRYWHGFLSSRLFLPELFFFGLSLFSNA
SNTSRIEIMAKGTVPLVNMVNNLIKDRE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgatggatactctactaaagactcataacaagcttgagtttttcaatccaatt
catgggtttcctgataaagttggaaccctgagttgtttgaagtttcgaaaccaggagctg
aggtttggctctagaagatcgaatgtaaattgggggaagaacggttctgtaaaggctagt
agtagtgcccttttggagcttgttcaagaaaccaagaaagaaaatcttgaatttgacctt
cctttgtatgacccgtcgaatggccttgtagtggacttggctgtagttggtggaggtcct
gcagggttagcggtagcacaacaagtttctgaggcaggacttgcggttgtgtctatagac
ccttctccaaaattgatatggccaaacaattatggtgtttgggtggatgagtttgaggct
atggatttgctagattgccttgacactacctggtcaagtgcaattgtttacattgatgac
cagacaaccaaagagctcggaagaccgtatggaagggttaacaggaagcagcttaaatct
aaaatgatgcagaagtgcatatcaaatggagttaaatttcatcaggctaaggttgtaaaa
gttgtacacgaggaagctaaatccctattgatatgtgatgatggtgtgaccattcaagct
gctgtagttcttgatgcaaccggtttttcaagatgtcttgttcaatacgacaagccatat
aatccaggataccaagtagcttatggaatagtggcagaagtagaagaacatccttttgat
gtaaataagatgattttcatggactggagagattcccatcttaatggcaatacagaatta
aaagaaagaaacagtaaaatccctacgtttctttatgctatgcctttttcatctgacaga
atatttcttgaagaaacatcccttgtagctcgtccaggtttagccatgggagatattcag
gagagaatggtggctcgcctaaggcatttgggtattaaagtgaagagcattgaagaggat
gagagatgtgtgatcccaatgggagggcctctgcctgtactccctcagagagtagtggga
attggcggtacagctggtatggtgcatccttccactggatatatggtagcaagaactcta
gctgctgcaccagttgttgccaatgcaatagttcagtaccttggtggttctaagaaaggc
gctttgggaaacgaattgtctgcagaagtctggaaagatctatggccaatagagagaaga
cgccagcgagaattcttttgctttggtatggatattttgctaaaactcgatttgcctggt
acaagaaggtttttcagtgctttttttgacctggaacctcgctattggcatggattcttg
tcttctcgactatttcttcctgaactattctttttcgggctttctcttttctcaaatgcc
tccaacacttctagaatagagatcatggcaaaaggcacggttcctttggtaaacatggta
aacaatctgatcaaagatagagaatag
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