Daucus carota (carrot): 108196570
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Entry
108196570 CDS
T05350
Name
(RefSeq) biotin--protein ligase 2 isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00780
Biotin metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
108196570
Enzymes [BR:
dcr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
108196570
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
108196570
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
108196570
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
108196570
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
Motif
Other DBs
NCBI-GeneID:
108196570
NCBI-ProteinID:
XP_017219394
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All DBs
Position
7:12009454..12020399
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AA seq
363 aa
AA seq
DB search
MRISPRFFSLKSSPHFLSLPLLYHNTTKPFSLSSSAMESESTCILVLAGKSAADKELANY
MKASNIPKLPDIRDVSLLLHEESLNEESFRINSYMNSLSTTCFGRFLIWSPRLPSTHDVV
SKNFEELPVGSVCVADVQYKGRGRSMNVWESPKGCLMFSFTIQMEDGRIVPLVQYVVSLA
MTEAINDVCTKDGVPYLDVRIKWPNDLYLDGLKVGGILCTSTYRSKKFNVSAGLGLNVDN
EKPTTSLNAILKKLTTVSYQLQREDIVSAFFNKFEIFFDLFATQGFKPLEELYYKTWLHS
GQRVIVEEKNDDKDHGRQSMVTIQGLTSSGYLLAIGDDNQMCELHPDGNSFDFFKGLIRR
KLA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttccccccgctttttctctctaaaatcttcacctcactttctctctctacca
ctcctatatcataataccaccaaacctttctctttatcttcttcagctatggaatccgaa
tccacttgtattttagtacttgctggaaaatcagctgccgacaaggaactggctaattat
atgaaagctagcaatatccccaaactccctgacattcgggatgtttcgctgcttttacat
gaagagtctctgaatgaagaatcctttcgaataaattcatatatgaactctctttcaact
acctgcttcggacggtttcttatttggtctccgcgtttgccttcaactcatgatgttgtt
tcaaaaaattttgaagagcttcctgttggctcagtatgtgttgctgatgttcaatataaa
ggccgaggccgctcgatgaatgtttgggaatctccaaaaggttgtcttatgttttcattt
acaatacaaatggaagatggtagaattgttccacttgtacagtatgtcgtgagtcttgct
atgacagaggctataaatgatgtctgcactaaagatggtgttccatatcttgatgtcaga
ataaagtggcccaatgatttgtacttggatggtcttaaagtgggaggcatcctgtgcaca
tcgacttatagatcaaagaagtttaatgttagtgctggattaggtttgaatgttgataat
gagaaaccgactacatccttaaatgccatccttaaaaagttgactacagtttcttaccaa
ctgcagcgggaagatattgtttccgccttcttcaataagtttgagattttttttgatctt
tttgcaactcaaggattcaaacctcttgaagagctatactacaagacatggctacatagt
ggtcagagggtcattgtagaggaaaagaatgatgacaaggaccatggaagacaaagtatg
gttaccattcagggtttgacatcttcaggatatctattagcgataggtgatgataatcag
atgtgtgagcttcacccagatggcaatagttttgacttcttcaaaggccttatcagaaga
aaattagcgtaa
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