Daucus carota (carrot): 108200616
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Entry
108200616 CDS
T05350
Name
(RefSeq) beta-hexosaminidase 2
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00511
Other glycan degradation
dcr00513
Various types of N-glycan biosynthesis
dcr00520
Amino sugar and nucleotide sugar metabolism
dcr00531
Glycosaminoglycan degradation
dcr00600
Sphingolipid metabolism
dcr00603
Glycosphingolipid biosynthesis - globo and isoglobo series
dcr00604
Glycosphingolipid biosynthesis - ganglio series
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
108200616
09103 Lipid metabolism
00600 Sphingolipid metabolism
108200616
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
108200616
00531 Glycosaminoglycan degradation
108200616
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108200616
00604 Glycosphingolipid biosynthesis - ganglio series
108200616
00511 Other glycan degradation
108200616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108200616
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
108200616
Chaperones and folding catalysts [BR:
dcr03110
]
Intramolecular chaperones
Others
108200616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
108200616
NCBI-ProteinID:
XP_017224322
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All DBs
Position
9:complement(9578101..9581400)
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AA seq
583 aa
AA seq
DB search
MKSHTFHFSPVVYILFILFLSNRNYIDIISAAGYPINVWPKPTTFEWTHPESVPLAPSFT
ITSPYHKYLTAAVNRYVRQILKEHHTPLITPSVDSPSTFPLKSLRISVTDISAPLTHGVS
ESYNLTVPGAGGVTAVMTAATPWAAMRGLETFSQLVWGNPGRVGSGLFISDAPLFGHRGV
LLDTSRNFFSVDDIMRLIKGLSMNKMNVFHWHITDSHSFPIVVPSEPMLSEKGSYGGGMV
YTPEDVKRVVEFGFEHGVRVLPEIDMPGHTGSWAEAYPEIVACAKMFWWPAGSEWADRLA
SEPGAGQLNPLNPKTYEVLKNVIRDVIAMFPEPFFHAGADEVIPGCWKVDKTIQTFLANN
GTLSQVLEIFINTTYPYIVSQNRTVVYWEDVMLDDTIKVDPTFLPKETTILQTWNNGPNN
TKRIVNAGYWTIVSSSDFYYLDCGHGGFVGNDSQYAQKPGTDQGKGGSWCAPFKTWQTIY
NYDITYGLSKEQAKLVLGGEVALWTEQADATVLDSRVWPRASAMAEALWSGNVDESGMKR
YAEATDRLIEWRQRMVNRGIGAEAIQPLWCIRNPTMCNTVQDV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctcacacattccatttttctcctgtggtatatattttatttattttatttctg
tcgaaccgtaattatatcgatataatctcggcagctggatatccgattaatgtgtggccc
aagccaactactttcgagtggacccaccccgagtcggtcccacttgccccatctttcact
attacttccccttaccacaaatacttaacggccgccgttaaccgttacgtccgtcaaatc
ctgaaagagcatcacactccacttatcaccccttccgttgactctccgtcaacttttccg
ttaaaatcgctcagaatctccgtgaccgacatttccgctcccctgacccacggcgtgtcg
gaatcctacaacctgaccgtccccggcgccggcggcgtcaccgccgtcatgacggcggcg
acgccgtgggccgccatgagggggctggagacattctcccagctggtgtgggggaatccg
ggtcgggtcgggtcgggcctgtttatatccgacgcgccgttgttcgggcacaggggagtg
ctgttggatacttcgaggaattttttcagtgtggatgatataatgaggttaattaagggg
ttgagcatgaataaaatgaatgtgtttcattggcacattacggattcgcattcgttccct
attgtggttccgtcggagccgatgttgtcggagaaaggatcgtacggtggtggaatggtt
tatacgcctgaagatgtcaagagagtggtggaatttgggtttgagcatggggttagggtt
ttgcctgaaattgacatgccaggtcatacaggatcatgggctgaagcttaccctgaaatt
gtcgcttgtgctaagatgttttggtggcctgctggatctgaatgggctgaccgtcttgca
tcagaacctggagctggtcaactcaaccctttaaaccccaagacatatgaggtcctgaaa
aatgtcattcgtgatgttattgctatgtttcctgaaccatttttccatgccggcgctgat
gaagtgattcccggttgctggaaggttgacaaaaccattcagacctttcttgcaaacaat
gggactctaagtcaggtccttgagatatttatcaacactacctacccttacattgtttcc
caaaaccgaaccgtggtttactgggaagatgttatgttggatgatacaatcaaggtcgat
cccacatttcttcccaaggaaactaccatcctgcagacatggaacaatggtccaaacaat
acaaaaagaatagtcaatgctggctactggactattgtgtcttcatcagacttctattat
ctggactgcggacatggaggttttgtggggaatgacagccagtatgctcaaaaaccaggt
acggatcagggtaaaggtgggtcgtggtgtgcacccttcaaaacatggcagacgatatac
aattatgatattacatacggtttgagcaaagagcaagcgaaactcgtgttaggaggtgag
gtagcactgtggactgagcaagctgatgcaactgtgcttgattcacgggtatggccaaga
gcttcagcgatggctgaagctctatggtcgggtaatgttgatgagtcgggaatgaaaagg
tatgcagaagcaacagataggttaattgaatggaggcagagaatggtaaacaggggaatt
ggagctgaagccattcagccactctggtgtattagaaatccaacaatgtgcaacacagtt
caagatgtctag
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