Daucus carota (carrot): 108206999
Help
Entry
108206999 CDS
T05350
Name
(RefSeq) solanesyl-diphosphate synthase 1, mitochondrial
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00900
Terpenoid backbone biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108206999
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dcr01006
]
108206999
Enzymes [BR:
dcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108206999
Prenyltransferases [BR:
dcr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108206999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
108206999
NCBI-ProteinID:
XP_017232944
LinkDB
All DBs
Position
2:30133752..30149236
Genome browser
AA seq
417 aa
AA seq
DB search
MFGRECARILRARSCSTRLVFPSNQYCWVLGDIRAASPIYNENSISASRAIHNVGLAVKS
QILPELEVPLNPFSLVADEYAILADSLQKMIVTELPKLASDADLFFNMMMTERRFQPSVL
LLMEKAMNVPTSTQDSEQCLDSSPLVFSFGHQSIHAIAEMSNIYYHVRHNMLDDGDTRYH
PSSLKFVLDIKLSVLLGDFMLSKIFVILASTENSEVQSILSRVIEHLVLGQAMEMTSSSQ
QLCSIANYLEMVYNKKASLLANSCKAIAILSGKDEEVTTMAFDYGKYLVYAYQLMDDIAD
ITGRSATSGNLSSNFSRGMLGSPMLYAIEEFPQLRTFVDRGFKNPSELDLALEYLKKSRG
MQRTRELATKYAGLALEAIESLPRSNNKDTEVWRRALVDLAQNIIRSSQVSKDICWV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggagggaatgtgctcgaattttaagagctagatcctgcagcactcggttggtg
tttccttccaatcagtattgttgggtgctgggagacataagagcagcgtccccgatttat
aatgaaaattctatcagtgcttcacgtgcaattcataatgttggactggctgttaaatct
caaattctacctgaacttgaggtgccactcaacccattttcacttgttgcggatgaatat
gcgattttagctgatagtttacaaaaaatgatagttactgagctgccaaaacttgcctct
gatgctgatcttttcttcaacatgatgatgacagaaaggaggttccaaccatcggttcta
ttattgatggaaaaagctatgaatgtccctacatcaactcaagattcagagcagtgctta
gattcatcacctttagtgttctcttttggacatcaaagtatacatgcaatcgcagagatg
tcaaatatttattatcatgtccgtcacaatatgcttgatgatggtgatacaagatatcac
cctagttctttgaagtttgttttggatatcaagctctcagtattgctcggagatttcatg
ctttccaaaatatttgtgattcttgcgtctacagagaactccgaggttcagtcaatactt
tcaagggtcatagaacatcttgttttaggccaggcaatggaaatgacctcttcatctcaa
caactttgtagcattgcaaactatttggagatggtgtataacaaaaaggcatctttactg
gcaaatagctgcaaagcaattgccattttatcagggaaagatgaagaagttacaacaatg
gcctttgactatggaaaatatctggtttatgcatatcagctaatggatgatattgctgat
attactggcagatctgctacctccgggaacctatcatctaatttttccaggggaatgctt
ggatccccaatgctatatgcgatagaagaattccctcaattacgcacgttcgtggaccgt
ggattcaagaacccctcagaactggatttggctcttgagtaccttaaaaagagtagagga
atgcagagaacaagggaactggcaaccaagtatgcgggacttgccttggaagccattgag
agtttgcccaggagcaacaataaggatacagaggtgtggagacgagctctggtagatctt
gctcaaaatatcatccgaagctcacaagtgtccaaggatatttgttgggtataa
DBGET
integrated database retrieval system
