Daucus carota (carrot): 108209172
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Entry
108209172 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108209172
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00052
Galactose metabolism
dcr00511
Other glycan degradation
dcr00600
Sphingolipid metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108209172
09103 Lipid metabolism
00600 Sphingolipid metabolism
108209172
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108209172
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108209172
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
BetaGal_ABD2
BetaGal_gal-bd
Motif
Other DBs
NCBI-GeneID:
108209172
NCBI-ProteinID:
XP_017235440
UniProt:
A0A161XFW5
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All DBs
Position
2:complement(43124496..43135439)
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AA seq
1111 aa
AA seq
DB search
MASFVGPPVPLPKNGYKAYEDPSFIKWNKRDAHVTLRCQDSVEGSLRYWHERNKVNLLAS
QSAVWDDDAVSQALDCAALWVKDLPFVKSLSGYWNFLLASSPASVPSNFYDNSFQDSTWD
KIPVPSNWEMHGFGRPIYTNVVYPFPLNPPRVPDDNPTGCYRTYFNLPKEWEGRRIFLHF
EAVDSAFHAWINGVAIGYSQDSRLPAEFEITSLCHSCGSQKQNVLAVQVYRWSDGSYLED
QDHWWLSGIHRDVLLLSKPQVFIMDYFFRSNLEKDFSSADLQVEVLIDDSKETSKDNFLK
NFTIEAAVYDTGSFSDSDGQVDLLSADVCHLKFCPPPAGVLGFHGYMLSGKLKMPKLWTA
EHPNLYTLVVTLKDASGQIIDCESSQVGIRMISKAPKQLLVNGQPVVIRGVNRHEHHPRL
GKTNLESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYT
GHFKHPTKEPVWASAMLDRVIGMVERDKNHACIILWSLGNEAKYGPNHDALAGWIRGKDP
SRPLHYEGGGSRTTATDVVCPMYMRVWDIVKIAQDPNETRPVILCEYSHAMGNSNGSLDE
YWKAIDTTFGLQGGFIWDWVDQGLLKEGSDGTKHWAYGGDFGDIPNDLNFCLNGIVWPDR
SIHPAVHEVKYCYQPIKVSLEDGIIKITNTHFFDTTEGLVFDWTLYGDGCELGSGILSAP
TIEPQKSFEIKWESGVWYQLWSSSSAAENFMTITGKLLHSTRWSESGHFILSSQIQLPVQ
HESIAHVIKVKDATFSSEITEDAIRVSNHKLWEIKINKCTGAIDSWTVEGTRVLQKGIFP
CFWRAPTDNDKGGESKSYYSRWKAANLDAVSFLTESCTIGNKTDSLLEVAVVYLGVVKHK
EKTVSESKDSDVLFKINVGYFIHGTGDIVMKCNVIPTPNLPPLPRVGVEFHLDKSVNHVK
WFGKGPFECYPDRKSAAHVGVYEMNVDDMHVPYIVPGECSGRADVRWATFLNKEGCGLFT
SIYGESPPMQMNASYYTTEELDRATHNEELIKGDYVEVHLDHKHMGVGGDDSWSPSCHEK
YLVPAVPYAFSIRFCPITSATSGHDLYKLQL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcgttggtcctcccgttccgcttccaaaaaatggttacaaggcttatgaa
gatccctcttttattaagtggaacaagagagatgctcatgttacattacgttgccaggac
tcagttgaaggatctcttagatactggcatgagcgcaacaaagtgaacctactggcatct
caatcagcggtttgggatgatgatgctgtttctcaggctcttgattgtgccgctctttgg
gtcaaggatttgccttttgtgaagtccttgtctggttattggaattttttgcttgcttcc
tctcctgccagtgttccttcgaacttttatgataattcattccaagattcaacatgggac
aaaatacctgtaccttctaactgggaaatgcatggatttggtcggcctatatacacaaat
gtagtatatccatttccacttaatccacctagagttcctgatgataacccaacaggctgc
tacaggacatacttcaacctaccaaaagaatgggaaggtcgaaggatatttttgcacttc
gaggctgttgattctgccttccatgcatggataaatggtgttgctattggatacagtcag
gacagtagactacctgcagagtttgaaattaccagtttatgccattcatgtggttcccag
aagcagaacgtactagctgtccaagtctataggtggagtgatggttcctatcttgaagat
caagaccactggtggttatctggtattcaccgtgacgtgctacttctatccaaaccacag
gtgttcatcatggactatttctttagatcaaacttggagaaagatttctcttctgctgat
ttacaggttgaagttctcattgatgactcaaaagaaacatccaaggataatttcctcaaa
aacttcactatcgaagctgcagtctatgatactggaagcttttctgacagtgatgggcag
gttgatctgctttcggctgatgtatgtcatttgaaattttgtccaccacctgcaggagtt
cttggtttccatggatacatgctttcaggaaaacttaaaatgcccaagctttggacagcg
gagcacccaaatttgtatactcttgttgtcaccctcaaagatgcgtcaggccaaattatt
gattgtgaatcatcacaagtaggcatacgcatgatctcaaaagctccaaaacagcttctt
gtaaatgggcaaccagttgtcataagaggggtaaacaggcatgaacaccatccacgtctt
ggaaaaacaaacttggagtcctgcatggttaaggatttggttttaatgaagcaaaataat
ataaatgctgtaagaaacagccattatccgcaacatccacggtggtatgaattgtgcgat
ctgttcggaatgtacatgattgatgaagccaacattgagacgcatggttttgattatact
ggacatttcaagcatcccaccaaggaaccagtatgggcttcagctatgttggatcgtgtc
atcggcatggttgagagggacaaaaatcatgcatgcattattttatggtccttggggaat
gaggcaaaatatggtcccaatcatgatgcacttgctggctggatacgtggtaaggatcca
tcaaggcctttacactatgaaggtggtggatctaggacgactgctacagatgtagtgtgt
ccgatgtacatgcgtgtatgggacatagttaaaatagcccaagatcctaatgaaacacgg
cctgtgatattatgcgagtattcgcatgcaatgggaaacagcaatggaagtcttgatgaa
tactggaaggcgatcgatactacttttggtcttcaggggggctttatctgggattgggtt
gatcagggattgttgaaggaaggttctgatggcactaagcattgggcgtatggaggtgat
tttggtgatatcccgaatgatttgaacttttgtcttaatggtatagtgtggccagatcga
tctattcatcctgcagtgcacgaggtcaagtattgttaccagccaatcaaggtgtcactc
gaagacggcataattaagatcaccaacacccacttttttgatacaacagaaggtttagtg
tttgactggaccctttatggtgatggatgtgaacttggatccgggatcctctctgcacca
acaattgaaccacaaaagagtttcgaaataaagtgggagtcaggtgtttggtatcagctt
tggtcttcatcatctgctgctgaaaactttatgacaataactgggaagcttctgcactct
acgcggtggtctgaatctggtcatttcattttgtcttcacaaatccagctacctgttcag
catgaatctatagcccatgtgatcaaagtgaaagatgccactttctctagtgaaatcacg
gaagatgctataagagtaagcaaccataagttgtgggagataaagataaacaagtgcact
ggcgccattgatagttggacggttgaagggactcgagttttgcagaaagggatattcccc
tgcttctggcgagcaccgacagataatgacaaaggaggagagtcaaaaagttactattca
aggtggaaagctgctaatcttgatgctgtatccttcctgactgaaagttgtaccattggg
aataagacagacagtcttctggaagtagcagttgtctatcttggtgtagtaaaacataag
gagaaaactgtctccgagtcgaaagattcagacgttctttttaaaattaatgttggatac
ttcatccatggtactggagatattgttatgaaatgcaatgtgattccaactccaaatctt
ccaccattgccgcgtgttggagttgaattccacttggacaaatctgtgaaccatgtcaag
tggtttggcaaggggccatttgaatgctatccagaccgaaaatcagctgcccatgttgga
gtatatgaaatgaatgtcgatgatatgcatgtcccatatattgttcctggagaatgttca
ggtagggcagatgtgaggtgggcaacatttttgaacaaagaaggttgtggactctttacg
agcatatatggtgagtctccacctatgcaaatgaatgcaagttactacaccacagaagag
cttgaccgagcgacacacaatgaagaacttattaaaggagattatgttgaggttcatctt
gatcacaagcatatgggtgtgggaggagatgatagttggtcgccaagttgccatgaaaag
tatttggttccggctgtgccatacgccttttccatcagattctgtccgatcacttctgcc
acttccgggcatgacctgtacaaactgcagctctga
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