Daucus carota (carrot): 108212198
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Entry
108212198 CDS
T05350
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Module
dcr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108212198
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108212198
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
108212198
NCBI-ProteinID:
XP_017239413
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Position
3:9800866..9804871
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AA seq
404 aa
AA seq
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MHQPPPPATAGKRVAGVSLPEVKLMKLTKLLFNVIVQRILGAVMVIMSPESTVADLITVV
LQQYVKEGRGTVSVPDGTYVIDPIQFSGPCQGQVTFQLDGTLQAPTGKIDANDWIKFHNV
DGLIIQGSGTLNGEGDLAWVGHCPGCPPLTTSLTLSFVNNGHIKDITSLNSKGFHIKIIN
GGDTIIEHVTISAPGDSPNTDGIHTSGASNINILNSEIGTGDDCISIGGGSQNINITGVT
CGPGHGISIGSIGKNTDDSSVTGVYVNGCTMSNTQNGVRIKTYTSDCMATVSDVTFQDIT
VDQSKNPIIIDQNYCGGHQECIGNSHVQVSDVKFIGVQGTSISPIAVKLQCSPEKPCEGI
ELDTISISLNDGGETTSSCSNVNVTYNGPQNPPTCSNSLHLNHM
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagccgcccccgcccgctactgcaggaaaaagagttgctggagtatctttaccg
gaggtgaagctgatgaagttgacgaagctgttattcaacgtgattgtgcaacggatttta
ggtgcagtgatggtgatcatgtcgccggagtcgactgtcgctgacttgatcacagtagtg
ctacaacaatatgttaaggaagggagggggacagtttctgtaccagatgggacatatgtg
attgatcccatacaattttcaggaccatgtcaaggtcaagtaacatttcaacttgacggg
actctgcaggctccaacgggtaaaattgatgctaacgattggattaaatttcacaatgtt
gatggattgatcattcaaggtagtgggacattgaacggcgaaggtgatttggcgtgggtt
ggacattgtccgggatgccctcctcttaccacttccctcacactatcatttgttaacaat
gggcacattaaagacattacatcgctcaacagcaaaggatttcatattaaaatcattaat
ggcggagatacaataatcgaacatgttaccatatcggcacctggtgatagtccaaacact
gacggcattcatacgagcggagcaagtaacatcaacatcttaaattcagaaattgggact
ggagatgattgcatatctatcggtggaggaagtcaaaacataaatattactggagttact
tgtggccctggacacggcatcagcattggaagtatcggaaaaaatacagatgacagtagt
gtaactggggtatatgttaatggttgcacaatgagtaatacacaaaatggcgtacggatc
aaaacatacacttctgattgtatggcaacggtttctgatgtcacatttcaagatatcacc
gtggatcaatccaagaatccaataattattgatcagaactactgtggcgggcatcaagag
tgcattggtaattcgcacgtacaagtgagtgatgttaagtttattggagtacaaggaaca
tcaatttctccaattgcagtaaaactccaatgtagtcccgaaaagccatgtgaaggaatt
gaactggatacaataagcataagtttaaatgatggtggtgaaactacttcatcatgctct
aatgttaatgtaacctataacggaccacaaaatcctcctacatgttcaaactcattgcac
ctcaatcatatgtaa
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