Daucus carota (carrot): 108215380
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Entry
108215380 CDS
T05350
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1A isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00270
Cysteine and methionine metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108215380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108215380
03032 DNA replication proteins [BR:
dcr03032
]
108215380
03036 Chromosome and associated proteins [BR:
dcr03036
]
108215380
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
dcr02048
]
108215380
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108215380
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108215380
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108215380
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108215380
Prokaryotic defense system [BR:
dcr02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
108215380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
108215380
NCBI-ProteinID:
XP_017243367
UniProt:
A0A166A8D3
LinkDB
All DBs
Position
3:9291642..9299994
Genome browser
AA seq
1770 aa
AA seq
DB search
MGSSSILDSPAADAEKRNIPGVEEKRNKRKAAVCDSEKGSASGKKKLKAHNLQSREVSAG
SPKILKLAAACADDKEKADKVSKEIPSTKTRKDQGVDEVVAVQKAHASQSREVSAGSRKM
PKRAAACADDKEKAVKISKKVSSSKTKKGQCVDEVAAEQKAQVSKSSEVSAGSRNMPKQA
AGCANDKVKAVKISRKSTKAKKDQGLDEEEVAVKEAHVSQSSEVSAGSREMPKRAADKEK
AVKISKKVSSVKAKKDQGLDEEEVAVQEAHVSKSSEVSAGSRKMPKRAAACADFKEKVVQ
ISKKASIIETKKDRCVDEEEMAVRLTAGQEDGRPCRRLTDFILHNSDGVQQPFEMLEVDD
LFISGLILPLEESSQKEDCSIRCEGFGRIEDWAISGYEDGVPIIWVSTDVADYDCVKPSA
AYKKHYEHFFAKATACIEVYKKLSKSSGGNPDLSFDELLAGVVRAMNGMKCFSRGVSIKD
FIISQGEFIYNQLVGLDETSKDDQQFLELPVLIALRDESSRHVNDFQERIGSTNGTLKIR
DNEDQKNSVTEEGEDKKMARLLQEEEFWKSMKQKKGQGSRVASTKYYIKINEDEIANDYP
LPAYYKTANQETDEYIIFDGGLDACYTDDLPRSMLHNWALYNSDSRLISLELLPMKPCAE
IDVTIFGSGVMTEDDGSGFNLETDTSHSSSSGSGTANVDGIPIYLSAIKEWMIEFGSSMV
FISIRTDMAWYRLGKPSKQYAPWYEPVLKTARVAISIITLLMEQARVSRLSFMDVIKRVS
EFEKGHPAFISTIPAVVERYIVVHGQIILQQFLEFPDEKIKKSAFVAGLTKKMEERHHTK
WLVKKKKILQRDEPNLNPRAAIAPVVSKRKAMQATTTRLINRIWGEFYSNYSPEDMKEGI
SSDEKEEEEAEEQEEIDDDEEDEEKETLVALEKTPTPTSTPRKSKSNSKLKDVSWNGKPA
GKRSSGEMLYKQATLHGKMIAVGGAVLTDDASAELPAIYYVEYMFESSDGTEMIHGRLLR
QGSETVLGNTANERELFLTNECMEFELMDVKMPVIVEIRSRPWGHQHRKINANADKIDKA
RAVERKNKGLETEYYCKSLYWPERGAFFSLPVNCMGLGSGICSSCSANKDHTEKEKFSVS
SCKTSFVYKGTDYSIHDFLYVSPDQFATERVGQETFKGGRNVGLKAFAICQLLEVVVPKK
AQQADDSSTEVKVRRFYRPEDISDEKAYCSDIREVYYSEETHTLLVEAIEGRCEVRKKSD
LPSFDAPTIYEHVFFCEYLYDPHKGSLKQLPSNIKLRYSTVKGAYDSSLRKNKGKCKEGE
DDLEAEKSKENCLATLDIFAGCGGLSEGLQQSGVCRTKWAIEYEEPAGDAFKLNHPDTTM
FINNCNVILKAIMDKSGDADDCISTPEAADLAAKLSEEELKNLPLPGQVDFINGGPPCQG
FSGMNRFNQSSWSKVQCEMILAFLSFADYYRPKYFLLENVRNFVSFNKGQTFRLAIASLL
EMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEETLPEWPEPMHVFAAPELKVALPGNKH
YAAVRSTQAGAPFRAITVRDTIGDLPMVTNGASKTTLEYQCDPISWFQKNIRANMMVLTD
HISKEMNELNLIRCQRIPKRRGADWHDLPEEKVKLSTGQLVDLIPWCLPNTAKRHNQWKG
LFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFYGNILHK
HRQIGNAVPPPLAYALGRKLKEALEGKGSM
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttcatcaattctcgattctccagctgctgatgcagagaagagaaatatacca
ggagttgaagagaagagaaataaacgaaaggctgcagtttgtgattctgagaaaggatct
gcaagtggcaaaaagaaactgaaagcacacaacttgcaaagtagggaggtttctgccggc
tctcctaaaatcctaaagctagctgctgcttgtgctgatgacaaagagaaggctgacaaa
gtatccaaagaaataccaagcactaaaacaagaaaagatcagggtgtagatgaagtcgtc
gctgtgcaaaaagcacatgcctcacagagtagggaggtttctgctggttcccgaaaaatg
ccaaagcgggctgctgcttgtgctgatgataaagagaaagctgtcaaaatatccaaaaag
gtatcaagcagtaaaacaaaaaagggtcagtgcgtagatgaagtagctgctgagcagaaa
gcacaagtctcaaagagtagcgaggtttctgctggttctcggaatatgccaaagcaagct
gctggttgtgctaatgacaaagtgaaagctgtgaaaatatccagaaaaagcactaaagca
aaaaaggatcagggtttggatgaagaggaagtggctgtgaaagaggcacatgtctctcag
agcagtgaagtttctgctggttcccgagaaatgccaaagcgagctgctgataaagagaaa
gctgtgaaaatatccaaaaaggtatcaagcgttaaagcaaaaaaggatcagggtttagac
gaagaggaagtggctgtacaagaagcacatgtctcaaagagtagtgaggtatctgctggt
tcccggaaaatgccaaagcgagctgctgcatgtgcagatttcaaagagaaagttgttcaa
atatccaaaaaagcatcaattattgaaacgaaaaaagaccggtgtgtagatgaggaggaa
atggctgtgcggctaacagctggacaagaagatggccggccatgtaggagactcactgat
ttcattttacacaattctgatggggtacaacagccctttgaaatgttggaagttgatgat
ttgtttatctctggcctgattttgcctcttgaagaaagttcccaaaaagaggattgtagc
atcagatgtgaaggctttggacgaattgaagactgggccatttctggctacgaagacggg
gttccaataatatgggtttcaacggatgttgcagattacgattgtgtcaaaccatcagct
gcttacaagaagcactatgaacacttttttgccaaagccactgcttgtattgaagtctat
aagaaattgtcaaaatcttctggaggaaatcctgatttgagctttgatgagttgcttgct
ggggttgttcgtgcaatgaatggtatgaagtgcttctctcgtggggtatccattaaagat
ttcatcatctctcagggtgagtttatctacaatcaacttgttgggttggatgagacatct
aaggatgatcagcaatttctcgagctacctgtcctcatagccctaagagatgaaagtagc
aggcatgtaaatgattttcaagaaaggattggatccacaaatggaacactgaagattaga
gacaatgaggaccaaaagaattctgtaacagaggaaggagaggataaaaaaatggcaaga
ttgctgcaggaagaagagttttggaagtcaatgaagcagaagaaaggtcagggttcaagg
gtggcttctaccaaatattatataaaaattaatgaggatgagattgcaaatgactatcct
ctgcctgcatattacaagacagccaaccaagaaacagatgaatacataattttcgatgga
ggccttgatgcatgttatactgatgatttgcctcgaagtatgcttcataactgggcatta
tacaactcagattcaaggcttatttccctggaacttcttccaatgaaaccttgtgctgaa
attgatgtaactatatttggatcaggggtgatgactgaggatgatggatctgggtttaat
cttgaaactgacacttctcattcttcctctagtggatcaggaacagcaaatgttgatggc
attcctatatacttgagtgccataaaggaatggatgatcgaatttggatcctcaatggta
tttatatcgatacgcacagatatggcctggtacaggcttggcaagccatcaaagcagtat
gcaccgtggtatgaaccagttcttaaaactgccagggttgcaatatccattatcacatta
ttaatggagcaggcccgagtttctcgtctttcatttatggatgttatcaaaagagtttca
gagtttgagaagggtcatcctgctttcatttcaactattccagcagttgttgaaagatat
attgttgtgcatggacaaattatcctgcagcagttcttagaatttcctgatgagaagatt
aaaaagtctgcatttgtggccggcctcacaaaaaaaatggaagaaaggcatcacaccaag
tggcttgtgaagaagaaaaagattttgcagagggatgaaccaaatttaaatcctagagca
gcaatagcccctgtggtatctaagaggaaggctatgcaggcaacaacaacaaggctaatt
aacaggatctggggtgagttttattcaaactactctccggaagatatgaaagagggaata
agtagtgatgaaaaggaggaagaagaagctgaagagcaagaggaaattgatgatgacgag
gaagatgaggagaaggaaactttagtggctttagaaaaaacacccacacccacctcaaca
ccaagaaaatcgaaatcaaactctaaactgaaggacgtaagttggaatgggaagcctgcg
ggtaaaagatcatctggtgagatgctgtataaacaggcaacactacatggaaaaatgatt
gctgttgggggagctgttttgacagatgatgcatctgctgaacttccagccatctattat
gtggagtacatgtttgaaagttcagatggaacggaaatgattcatggaagattgttgcga
caaggatctgaaacggttcttggaaatacggctaatgaacgggagttatttcttacaaat
gaatgcatggaatttgaactgatggatgttaagatgcctgttattgtggaaattcggtca
aggccttggggacaccagcacagaaaaataaatgcaaacgctgacaagattgataaggcc
agagctgtagaaaggaaaaataagggattggaaactgaatactactgcaaaagtttgtat
tggccagagagaggtgcttttttcagtcttccagttaattgcatgggtttgggttctggt
atctgtagttcttgcagtgcaaataaggaccacactgaaaaagaaaaattttctgtgagc
tcatgcaagacaagttttgtgtacaagggaactgattattccattcatgattttctctat
gtaagtcctgatcagtttgctacagaaagagttgggcaggaaaccttcaaaggtggaaga
aatgtgggattaaaagcttttgctatatgtcaattgcttgaagttgtggtccctaaaaaa
gcccaacaagctgatgacagttctactgaggtcaaggtaaggagattttaccgacctgaa
gacatttcagatgagaaggcgtattgctcagacattcgagaggtttattatagtgaagaa
acacacacccttcttgtcgaggcaattgaagggagatgcgaagtgagaaagaaaagtgat
cttccgtcatttgatgctcccactatatatgaacatgtgttcttttgtgaatatctctat
gatcctcataaaggttctctaaagcagttgccatcgaacatcaagttgaggtattcaact
gttaagggtgcatatgattcttccttaagaaagaacaagggaaaatgtaaggaaggggag
gatgatttagaagctgagaaatcaaaagagaactgtttggctacattagatatctttgct
ggttgtggaggcctgtcagaagggttgcagcagtctggtgtctgtagaacaaagtgggca
attgaatatgaagagcctgcgggtgatgcgttcaaactcaatcatccagacaccacaatg
ttcatcaataattgcaatgtgattttaaaggccatcatggataagagtggagatgcagat
gattgcatttcaacaccagaggcagcagatttagctgctaaattaagtgaggaggaacta
aagaatttgccactgccaggacaggttgattttatcaatggaggccccccttgtcaggga
ttctctggaatgaatagatttaaccagagctcttggagtaaagtacaatgcgagatgatt
ttagcattcttatcctttgcggattattatcgaccaaagtattttcttcttgagaatgtg
aggaattttgtgtccttcaacaagggacaaacattccgtctagctattgcttcccttctt
gagatgggttaccaggttcggtttggtatacttgaagctggagcatttggagttcctcaa
tcgaggaagcgtgcatttatttgggcagcatctcctgaagaaactctccccgagtggcca
gaaccgatgcatgtcttcgctgcaccagagctaaaagttgcattacccggaaacaagcat
tatgctgctgtccggagtacacaagctggagcaccgtttagagctatcactgttagggat
acgataggagatcttccgatggttaccaatggggcgtccaagacaactttagagtatcag
tgtgatcccatctcatggtttcaaaagaacatccgggcaaatatgatggtcttgacagat
cacatatcgaaagaaatgaatgagctcaatctcattcgctgtcagagaattccaaagcga
cgaggtgcagattggcatgaccttcccgaggaaaaggtcaaactgtcaactggacaatta
gtagacttgataccatggtgccttccaaatactgccaagaggcataaccaatggaaaggg
ctgtttggaaggttagattgggaaggaaactttcccacttctatcactgatcctcaacca
atgggaaaagttgggatgtgctttcatcctgatcaagacaggattttaacagttcgagag
tgtgcacgctcccaagggtttccagatagctatcagttttatggtaacattctacacaag
caccgacaaataggaaatgcggttcctcctcctttagcatatgcacttggaaggaaactc
aaagaagcattggagggcaagggctcaatgtaa
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integrated database retrieval system
