Daucus carota (carrot): 108221286
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Entry
108221286 CDS
T05350
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Module
dcr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108221286
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108221286
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
108221286
NCBI-ProteinID:
XP_017250664
UniProt:
A0A164XW60
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Position
5:8868411..8870721
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AA seq
399 aa
AA seq
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MASNAFVSEIIGLLSFLALLCISDSSKVTPDKFFDVRRYSAVSDGKTDNSQAFLKAWREA
CNCDGKCWVSVPKGTYKLGNVGFVGPCKGVTGFLIRGAIVAPTDPAQFTERWILFQYVEN
LLIKGGGTLDGQGASAWPHNDCRINPHCKPLPATLSFDFVTHSRIHHLKSLNSKSVHFNL
FACNNITINKVELTAPADSPNTDGIRIGQSNHIKISQSVIGTGDDCIAMINGVRNVVISN
VSCGPGHGISIGSLGRASNEQVHDIKVLNCNISNTQNGLRVKTWAPSFSGMVSNLTYQNI
LMNEVSNPIIFDQNYCPNRSCSKKAQSRVKISNATFKNIRGTSRSKIAVNFQCSGVEPCD
RVTLDNINLAYHGPGGPAESLCRNVKGTSTGTQRPPACL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatgcatttgtttcagaaatcattggtttgctaagtttcctggcattgctg
tgcatatctgattcgagcaaagttacaccagacaaattttttgatgtccgaagatatagt
gcagtctctgatggaaaaacagacaactctcaggcatttcttaaagcatggagggaagca
tgcaactgtgatggaaaatgttgggtttcagttccaaaagggacttacaagcttggaaat
gtaggttttgttgggccatgcaaaggggtcacaggatttttgattcggggggctattgta
gctcctactgatccagctcagttcacagagcgctggatcctctttcaatatgttgaaaac
ttgttgatcaaaggtggtggcacactggatggtcaaggtgcttcagcttggccacataat
gactgtagaatcaatcctcattgcaagcctcttcctgctacactgagctttgattttgtc
actcattcaagaatccaccacctcaagtcactaaacagcaaaagtgttcatttcaacctt
ttcgcatgtaacaacatcacaatcaacaaagttgaactgacagctcctgccgatagccca
aacacggatggcatccgtatcggacaatcaaaccacatcaaaatctcacagtctgtaatt
ggcactggagatgattgcatagccatgatcaatggcgttagaaatgtcgttatctctaat
gtttcatgtggcccgggacatggcataagtataggaagcctgggaagagcttcaaatgaa
caagttcatgatataaaagtactcaactgcaacatcagcaacactcaaaatggcctgaga
gtcaaaacatgggcaccctcattttctggcatggtttcaaatttgacataccaaaacatt
ttaatgaatgaagtgagcaaccccatcatatttgatcaaaactattgtccaaaccgtagc
tgcagtaagaaggcgcaatcacgtgtaaaaattagcaatgccacatttaagaatataaga
gggacatcaaggtcgaaaatcgccgtgaatttccaatgtagcggagttgagccatgtgac
agagtaacgctagataacatcaacttggcataccatggccccggaggaccagcagagtct
ttatgcaggaatgttaaaggaacttcaaccgggacacagcggcctccagcttgtttataa
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