Daucus carota (carrot): 108222050
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Entry
108222050 CDS
T05350
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108222050
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
108222050
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108222050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_11
PrmA
MTS
UPF0020
Methyltransf_23
Ubie_methyltran
GidB
CMAS
Cons_hypoth95
DREV
BpsA_C
Methyltransf_3
Methyltransf_4
Methyltransf_18
Spermine_synth
tRNA_U5-meth_tr
Met_10
PCMT
Methyltransf_32
DNA_methylase
Methyltransf_16
NodS
Methyltransf_15
Baculo_19
Motif
Other DBs
NCBI-GeneID:
108222050
NCBI-ProteinID:
XP_017251427
UniProt:
A0A164Y749
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Position
5:complement(14745621..14747267)
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AA seq
386 aa
AA seq
DB search
MFRSPKPLSLCIPRCVIRQHFLQICEKYTHLHKNRIEDDHNGKYRKKKENHEVFLQLHKS
RGQHLLTNQRVLDSIVQKSDIRSTDTVLEIGPGTGNLTLKLLEVAKHVIAVEIDKRMIEI
LNKRVAECGFEHKITVINKDALKAEFSEFDLVVANIPYNISSPLLAKLLFGSSTFRSATL
LLQKEFARRLLANPGDSDYNRLAVNVKLVADVQFVMDVSKRDFVPCPKVDSSVVMIFPKD
DVPYKDLDEWGAFTKTCFTKKNKTLGATFKQKKKVMELYKLFNRRDLSEEEKSADGCSND
RCNDEDGEVKEDCSDEEACDQLSGLDTGVSNFKDKIMAVLKSGGFDDKRPSKLPNTELLK
LLLLFNQAGIYFYDQARPADDEFLPN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtttagatctcccaaacctctctctttatgcattcccagatgcgttattcgccaacat
tttctccaaatttgcgaaaaatacactcacctacataaaaacagaatcgaagatgaccat
aatggaaaatatagaaagaaaaaggaaaatcacgaagtttttttacagctgcacaaaagc
aggggacaacaccttcttactaatcaacgtgttctcgattcaattgttcaaaaatccgat
ataagatccacagacaccgttctcgaaatcggtcctggcactggaaatctcactctcaag
cttcttgaagttgctaaacatgtcatagctgtagagattgacaagcgtatgattgagatt
cttaataagcgtgttgcggaatgcgggtttgaacataagattacggtgattaataaggat
gcattgaaggctgagttttcagagtttgatcttgttgtggccaacattccgtataatatt
tcgtcgcccttgttggcgaagttgttatttgggagtagtacgtttcgtagtgcaactctt
ttgcttcagaaagaattcgcgaggaggcttttggctaatcctggtgactctgattataat
cgtctcgctgtgaatgtgaagttggtagctgatgttcagtttgttatggatgtgagcaag
agagactttgttccttgccctaaggtcgactcgtccgtggtcatgattttcccgaaagat
gatgttccttacaaagatcttgatgaatggggtgcttttacaaagacatgcttcacgaag
aaaaacaagacattgggtgcaacttttaagcagaagaagaaggttatggagttgtacaag
ttgtttaacaggagagacttgagcgaagaagagaagtctgctgatggctgtagtaatgat
cgctgcaatgacgaggacggagaagtgaaagaagattgtagcgacgaggaagcttgtgat
cagttgtctggcttagatactggagtcagtaacttcaaggacaaaatcatggcggtacta
aaatcaggtggattcgatgataagagaccctcaaaactacccaacacagagttgctgaaa
ctgctgcttttatttaatcaagccggaatatacttttatgatcaagcaagacctgcagat
gatgagtttttacccaactag
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