Daucus carota (carrot): 108223101
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Entry
108223101 CDS
T05350
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108223101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108223101
Enzymes [BR:
dcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108223101
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108223101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
108223101
NCBI-ProteinID:
XP_017252668
LinkDB
All DBs
Position
5:complement(43998576..44013115)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSSNTVPPHRTTAPDFSPLNEMVRHHIESFDHMIDFGLETMVKNIKPVEVFDTAANKKLR
IWLRSPVVYPPQKDSRGKSTTATLNPFECRQARISYDGKLMMEVCFQYDDSAAVLKETFN
FGQLPIMLKSNKCSLRNADPKKLVSLKEEASEAGGYFILNGLERVIRLLILQKRNYPMSF
VRSSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLSNGSARLGFWAQGKEYMLPVGLVL
KALADTTDQELYVSLTCCYNGKYERVKGAVGTQLVGERVKIILDEVRNLSLITHKQCLQH
IGKHFQQIMHGMHKESHTVVGNAVLKEYILVHLDDNRDKFNLLIFMLQKLFSLVDQTSVP
DNPDALQTQEVLLPGHLITVYLKEKLQEWLLRAARELQDEINSGNKSLDSMNLMDIRKVM
QRNSSKLIGGSVDNMLKTGRMTTRYGIDLPQSAGMTVQADRLNFLRFISHFRAVHRGASV
AGLRTTSVRKLLPESWGFICPVHTPDGEPCGLLNHMTSCCRITSFYDSGGNLKDFFKMRK
SILTILIGVGMIPSWPRLVQSALPEVFSVLLDGCVVGTIASNMVEKAVTHLRRLKLSANS
MIPDDLEVGYVPLSIGGTYPGLYLFTCPSRFVRPTKNLVPPPTESNNIELIGPFEQVYME
IRCPDGGDGGRKDLGPATHEEIHPTGILSMVANLTPWSDHNQSPRNMYQCQMGKQTMGFA
SQAINCRADQKLYHLQTPQTPIVRTGTYEKYGIDEFPLGTNAIVAVLAYSGYDMEDAMVL
NKSSVDRGFCHGHIYQTESIDLAEKNSRKTRMFRRDGKSSKLLIDSDGLPHVGQTIRPDE
PYCNIYDADTNHTRSQKLKGTEPAIVDYVAVDVKNKKHLQKVNIRFRRQRNPVIGDKFSS
RHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESMAAKGGCLHGKF
VDATPFSSSLKKTDEKKTSESNTLVDELGSKLTALGFNYHGVEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSSGRVDPLTRQPVKGRKQGGGIRFGEMERDSLLAHGAAYLL
HDRLHTSSDHHIADVCSICGSILTTSVSQPQKRVVREIAGIPPGRDPKKVACVACKTSKG
METVAMPYVFRYLAAELAAMNIKLTLQLKNEAGA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaacacggtgccgcctcatcggacaaccgctcctgatttttcgccgctgaac
gagatggtgcggcaccacatcgagtcgttcgatcacatgattgattttggcctcgaaacc
atggtcaagaatatcaagcctgtcgaggttttcgataccgcagcgaacaagaaattgaga
atatggcttcgaagtccggtggtttacccgcctcagaaggatagcagggggaagagtact
acagctactctaaatccttttgaatgtagacaagctagaatatcttatgacggaaagctt
atgatggaagtatgctttcaatatgacgattcagctgccgttttgaaagaaacgtttaac
tttgggcagcttcctataatgttgaagtcaaataaatgttccttgagaaatgcagatccc
aaaaaattggtttcgctaaaagaagaagcttctgaagcgggtgggtatttcatattgaat
gggctcgagagagttatccgccttctaatattgcagaaacggaactatcctatgagcttt
gttagaagttcctttcgtgatcgaagagaaggatacactgacaaagctgttgtaataaga
tgtgttagagaagatcaatctgcggtaacagttaagctgtactatcttagtaatggtagt
gcaagacttggattctgggcgcaggggaaggagtacatgcttcctgtgggtcttgttctg
aaggctcttgctgacaccacggatcaagagctgtatgttagtttgacttgttgttataat
gggaagtacgagagggtaaagggagctgttggcactcagcttgtgggtgaaagggtaaaa
attattcttgatgaagttcggaacttgtctcttataactcacaaacagtgtctacagcat
attggaaagcactttcaacaaattatgcatggaatgcacaaagaaagtcacactgtggtt
ggtaatgcagttctaaaggaatacatattggtccaccttgatgataatagagataaattc
aatcttctaatttttatgctacagaaacttttttctcttgtagaccagacatctgtacca
gacaacccggatgcattacaaactcaggaggtgctactgccgggccacttgattactgtt
tatcttaaggaaaaacttcaagaatggctactcagggccgcaagagaactccaagacgaa
atcaatagcgggaacaaaagtttagattcaatgaacttaatggatattagaaaggtcatg
caaagaaactcttcaaaactgattggtggatctgttgataatatgttgaagactggtaga
atgacaacacgatatggtatagacttgcctcagagtgctggtatgacagttcaagcagac
aggcttaatttccttcgtttcatttcacattttcgagctgttcatcgtggagcttctgtt
gctggtcttcgtactactagtgtgcgcaagctcttgcccgaatcatggggtttcatatgc
cctgtccatacccctgatggagagccatgtggattgctcaaccatatgacttcatgctgt
cgtataacatcattttatgattcgggtggaaatcttaaggacttcttcaagatgagaaag
tctatattgaccatcttaattggagttggaatgatcccgtcatggccaaggcttgtacaa
tctgctctacctgaagttttttctgtgctattagatggttgtgttgtgggcactatagca
tcgaatatggtggaaaaggctgttacccacttgcgaagattaaagctatcagcaaactca
atgattcctgatgatcttgaggttggatatgttcctttgagcataggtggaacttaccct
ggtctctacctgtttacatgtccttctagatttgtgaggcctaccaaaaatttagtgcct
cctcccacggaaagtaacaacatcgaacttattggaccatttgagcaggtgtacatggag
atacgatgtcctgatggcggagatggtggaaggaaagatttaggtccggccactcatgag
gaaattcatccaactggaatactcagcatggttgccaatttaacaccatggtctgatcat
aatcagagcccacgtaacatgtaccagtgtcagatgggaaagcaaacaatgggttttgct
tcacaagctataaactgccgtgctgatcagaaactatatcatcttcagactccccaaact
ccaatagtccgcactggtacatatgaaaagtatggcattgatgagtttcctttgggcaca
aatgcaatcgtggcagttttggcttattcaggatatgatatggaggatgccatggttttg
aataaatcatcagtggaccgtggattttgtcatggccacatataccagacggaatccata
gatttagcagagaaaaatagtcgaaaaacaaggatgttcagaagagatgggaagtcatca
aaattactgattgattcagacggtcttccgcatgttggccagactattagaccagatgag
ccatattgtaacatctacgatgcggatacaaatcatacaagaagtcaaaagttaaagggc
acagaacccgctattgttgattatgttgcggtcgatgttaaaaacaaaaaacatcttcaa
aaggttaatatacgctttagacgtcagagaaatcctgtgattggtgataaattcagcagt
agacatgggcaaaaaggtgtttgttcacagttgtggccagatattgatatgccattttca
ggagttactgggatgcgaccggatcttattattaatccccatgcatttccttcaagaatg
acgattgctatgcttttggaatccatggctgctaagggtggttgcttgcacgggaaattt
gtggatgcaacaccattttccagctcattgaagaagactgatgaaaagaaaacatcggag
tccaatactcttgttgatgaacttggttctaagctgactgcccttgggtttaattatcat
ggtgtggaggtactatacagtggtgtttatggcaccgaactaacatgcgagatctttatt
ggtcctgtctactatcaacggctccgtcatatggtttcagacaaatatcaggttcgttct
agtggaagagtagacccattaactcgacagcctgtcaagggaagaaagcagggaggaggt
attcggtttggagaaatggaacgtgattcccttcttgcacatggggcagcatatttgttg
catgacaggcttcacacgagttctgatcatcacattgctgatgtttgttcaatatgtgga
agtatcctgacaacgtcagtatcacagcctcaaaagcgagtagttcgggaaattgccggc
attcctcctggtagagatcccaagaaggtagcatgtgttgcttgcaagactagcaaggga
atggaaactgttgcaatgccatacgtgtttagatatttagctgctgaattagcagctatg
aacataaaactgaccctccaacttaaaaatgaagcaggagcctga
DBGET
integrated database retrieval system
