Daucus carota (carrot): 108227167
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Entry
108227167 CDS
T05350
Name
(RefSeq) glutamine--tRNA ligase, cytoplasmic isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108227167
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108227167
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108227167
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
108227167
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
108227167
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108227167
Prokaryotic type
Other AARSs
108227167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
DUF1890
Motif
Other DBs
NCBI-GeneID:
108227167
NCBI-ProteinID:
XP_017257666
LinkDB
All DBs
Position
6:complement(30355365..30364149)
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AA seq
790 aa
AA seq
DB search
MGVESEKSVQLFLSIGLDERTAKNTVANTKVTKNLLAVIDEAGVAEGCERAIGNLIYTVA
TKFPANALVHRPTLLQYIVTSKIKTPAQLEAAFAFLSNTASETLKVKEFEEACGVGIEVS
LEDMEKTVNDIFEENKNTIIEQRYRTNVGELFGHVRKRQPWADPKVVKQLIDTKLYALLG
EKTAADNEKPAKKKKEKPVKVEEKKAVEESTVPKPPEEDMNPYAVFPRPDENFKVHTEVF
FSDRPVLRACNSKEILEKHLKKTGGKVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERNGG
CYLRYDDTNPEAEKKEYIDHIEEIVKWMGWEPYKITYTSDYFQDLYDLAVKLIQKGHAYV
DHQTAEEIKEYREKKMNSPYRDRPIEQSLKLFDEMKRGMIEEGKATLRMKQDMQSDNFNM
YDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLD
ALELYQPFVWEYSRLNITNTVMSKRKLNRLVTEKWVDGWDDPRLMTLSGLRRRGVTSTSI
NAFVRGIGITRSDCSIIRLDRLEHHIREELNKSAPRKMVVLNPLKVVITNMEGGTSMDLD
AKKWPDAQTDDPSSFYKVPFSNVVYIEHTDFRVKDSKDYYGLAPGKTVLLRYAYPIKCTD
VILGDDKETVLEIRAEYDPLKKTKPKGVLHWVGEPSPGVEPLKVEVRLFDKLFLSENPSE
LDDWLGDLNPQSKVVMPCAYAVPTLRNATVGESFQFERLGYFTVDKDSTSDKLVFNRTVT
LRDSYAKVGK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggagagtgaaaaatcagtgcaactcttcctcagcatcggtttagatgaaaga
acggctaagaacacagtggctaataccaaagtcactaagaatctcctggctgtaattgac
gaggctggtgttgctgaaggatgtgaaagggctattgggaatcttatttacacggttgct
actaagtttccggcaaatgccctcgtgcatcgaccaactctacttcagtacatcgttact
tcaaagattaaaaccccagcccaattggaagctgcctttgcttttctatcaaataccgct
tccgagactttgaaggttaaggaatttgaagaagcttgtggagttggaattgaggtgtct
ttggaggacatggagaaaacagtaaatgatatatttgaagagaataagaatactataata
gagcaaagatatcgaacaaatgtcggcgaactttttggtcatgttcggaagagacagcca
tgggctgatccgaaagttgtcaagcaactcatagatacgaaattgtatgcgttacttggt
gaaaagactgctgcagataatgagaagcctgctaaaaagaaaaaagaaaagcctgtcaaa
gtagaggagaaaaaagctgttgaagaaagtactgtaccaaagccaccagaagaagatatg
aatccatatgctgtatttcctcgacctgatgaaaattttaaggtgcatactgaagttttt
ttcagcgatcgacctgtgctcagagcttgcaattcaaaggaaatacttgaaaagcattta
aagaaaacaggtggaaaagttttgacgcgctttccaccagaaccaaatggatatctgcat
ataggtcacgccaaagcaatgtttgtcgactttggtctggcaaaggaaagaaatggaggc
tgctatctaaggtatgatgatactaatcctgaagctgagaagaaagagtacattgatcat
atagaagaaattgttaagtggatgggatgggagccatataagatcacatacaccagtgat
tactttcaagatctatatgatctagctgtgaagctcatacagaagggccatgcatatgtt
gatcatcagacagctgaggagatcaaagagtacagggaaaaaaagatgaacagtccttat
agagataggccaattgaacaatctttgaaattgtttgatgaaatgaaacgaggcatgatt
gaggaagggaaagcaactctgcggatgaaacaggacatgcaaagtgataactttaatatg
tatgacctcattgcatatcgtatcaagtttactcctcatccacatgcaggagacaagtgg
tgtatttatccaagctacgattatgctcactgcatcgtggattctctagaaaatatcaca
cattcgctctgcacacttgaatttgagacacgacgtgcttcatattattggttattggat
gcgcttgagctttaccagccttttgtatgggagtactcgcgtttgaatatcaccaataca
gtgatgtcaaaacgcaagttgaaccgtcttgtgacagagaagtgggttgatggttgggat
gatcctcgtttgatgacattatctggattacgacgtagaggggttacctctacttccata
aatgcttttgtccgaggaattggaataacacgaagtgactgtagtataattcgtttggac
cgccttgagcaccacattcgggaagaactgaacaaatcagcacctcgtaaaatggtagta
ctaaatccacttaaggttgtaatcaccaatatggaaggaggcacatcgatggatcttgat
gcaaagaaatggccagatgctcaaacagatgacccatcttctttctacaaagttcctttt
tcgaatgttgtctacattgagcacaccgactttcgagttaaagactcaaaggactactat
gggcttgctccggggaaaacggttttactaaggtatgcatatcctataaaatgcacagat
gtaatacttggagatgacaaggagactgttctagagattcgcgcggaatatgatcccttg
aagaagacaaagcccaagggagttcttcactgggttggagaaccttcacctggagttgag
ccactgaaggtggaagtccgattgtttgacaaattgtttctttctgagaatccttctgag
cttgatgactggcttggtgatttgaacccccagtctaaagtggtgatgccttgtgcatat
gctgtacctacacttcgtaatgctacagtcggggagagctttcagtttgaaaggctaggt
tattttactgttgataaggattcaacttctgataagttggttttcaatcgaactgtaaca
ttgcgagatagttacgccaaggttgggaagtga
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