Dendrobium catenatum: 110107080
Help
Entry
110107080 CDS
T05027
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
dct
Dendrobium catenatum
Pathway
dct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110107080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110107080
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110107080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
110107080
NCBI-ProteinID:
XP_020692882
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MQRQKSILSFLQKPSPEAHNASGKTPCQIPSTLQPAQASNLGGISAKVPLADDVRGTDTP
PEKICRSLFTSRFPAAVDFDDESVAQPFSSILHKFAKNDQSNSSSTMNQNDSVSFGLLSK
SSMLEDNYSEKRNGMSLEDRENNDNDFVHGVDEKAQNIKFDLDLLGPETPAVRPRVPHFK
RIQNTSDFDQVTCSFVSGFNKRQKLNEELPGKGVHGDKSDISTSKFEWLNPYSIRDANGR
RPSDPLYDERTLYIPPDALKKMSASQKQYWSVKCQYLDVILFFKVGKFYELYELDAEIGQ
KELDWKMTVSGVGKCRQVGISEAGIDDAVEKLIARGYKVGRMEQVETSDQAKARGKNLVI
ERKLVLMATPSTVVDGSMGPDAVHLLALKEGETNNGSTVYGFAFLDYAALKFWVGSFFDD
GSNAALGALLVQVSPREVLYEKSGLSKETHKALLKYASRGSSTMQMTPIVLDLGFLDANE
VKKMINSHGYFRGTSNLWTTAIESEMHYDHVLSALGGLICHLNRLKLQDALRNGELLSYH
LYKDCLRMDGQTLLNLEIFGNNFDGGLSGTLYKHLDHCRTTSGKRLLRRWICHPLKEIDD
INDRLNVVEGLINNPEVISVMSQYLCKLPDLDRLLGRVKASVGSSYVLLLPLIGAKMLKQ
RIKAFGLLIKGLRMGMDLLMILQKEHKVSFLSKIVNLPVLSELNDLLKQLEAAMSEDFPH
YQDHDVKESDAETLSALIELFVAKAADWSQVIHALNCIDVLQSFAASVISSAGSMCRPVL
LSAKPSSSFVQGSCGPRLCIKGLWHPYAIGNNENGQVPNDINLGEDATEQQPCALLLTGP
NMGGKSTLLRATCLVVILAQLGCYVPGEKCTLSPVDVIFTRLGATDRIMSGESTFFVECS
ETASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVLRHLVENVHCRLLFATHYHPLTKE
FASHPHVNMQHMACTFDRKINGEQELVFLYRLASGSSPESYGLQVALMAGIPKSVVEAAS
TAGDRMKLMISENFKSSELRAEFSTLHEEWLKSILSLSSSSRDCWDEDTSDTILCLWHEM
RSLYRYDCFNKLA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcagaaatccatcctatcctttctgcaaaaaccctcaccggaagcccacaac
gcttccgggaagacgccttgccagattccgtcgacgctgcagccagcccaggcttcaaac
ctcggaggaatctccgccaaagttcctttagcggatgatgtcagaggaaccgacactcca
ccggagaagatctgtcgctcacttttcacttcgagatttcctgcggcggtcgatttcgat
gacgaaagcgtggcgcagcccttctcgagcatactccataagttcgccaagaatgaccag
tcaaatagctccagtacaatgaaccaaaacgacagtgtttcatttggtttgctatctaaa
tcctctatgcttgaggataattattcagaaaagagaaatggaatgtcccttgaagatagg
gaaaataatgataatgattttgttcatggcgttgatgagaaggcgcaaaatataaaattt
gacttggatttgctggggccagaaacccctgctgtgcggccacgtgttcctcactttaag
cggatacaaaatacaagtgattttgaccaggtgacttgctctttcgtttcaggatttaat
aaaaggcagaagctaaatgaagaactcccaggaaaaggagttcatggtgataaatctgat
atttctactagtaaattcgaatggcttaacccttattcaattcgagatgcaaatggtaga
cgccctagtgatccattgtatgatgagagaacattatacataccgcctgatgcattgaag
aaaatgtcagcatctcagaagcaatattggagcgtgaagtgccaatatttagatgttata
ctattttttaaagtgggaaaattctatgaactgtatgagttagatgcagagattggtcaa
aaagagcttgactggaaaatgacagtcagtggcgtgggtaaatgcagacaggttggaatt
tctgaggctggaattgatgatgcggttgagaaacttatagctcgggggtataaggtgggc
cgaatggagcaagttgagacctcagaccaagccaaagctagagggaaaaatttggttata
gaaagaaaattggtccttatggctactccatccactgttgttgatggcagtatgggtcca
gatgctgttcacctacttgctttgaaggagggggaaacaaataatggttctactgtttat
ggatttgcttttctggattatgctgctttaaaattttgggttggctctttttttgacgat
ggttccaatgcagcattgggggccctgttggtgcaagtttcacccagggaagttctctac
gaaaaatctggactctctaaagaaactcacaaggcacttttgaaatatgcttcaagaggt
tcgtcaacaatgcaaatgactcccattgtgctagatctaggatttttggatgctaatgaa
gttaagaaaatgataaatagccatggatatttccggggaacttctaatctatggactaca
gcgattgagagtgaaatgcactatgatcacgttttatctgctcttggtggacttatatgt
catttgaatcggttgaagctacaggatgctttgcgcaatggggagcttttgtcttatcat
ctgtacaaagattgcctaaggatggatggtcagaccctcttgaatcttgaaatttttgga
aataattttgatggtggcttatcagggacattgtataaacatctcgaccattgcagaact
acttctggtaaacgacttttaaggaggtggatctgccatccacttaaagaaattgatgat
attaatgacaggcttaatgttgttgagggcttaataaataacccagaagtgatttctgtt
atgtcccagtatctgtgtaagctcccagatcttgatagactgttggggcgtgtcaaggca
tctgttggttcctcatatgtgcttttgttgcctttgattggtgcaaagatgttgaaacag
cggatcaaagcgtttggtttacttataaaagggcttaggatggggatggatttgttgatg
atcttacaaaaagagcataaagtttctttcttgtcgaagattgtgaatctacctgtgctg
agcgagcttaatgatctacttaaacagttagaagcagctatgagtgaagatttccctcac
taccaggaccatgacgtaaaagaatcagatgctgaaacattgtctgcgttaattgagcta
tttgttgcaaaggctgcagattggtctcaagtcatccatgcgctcaactgcattgatgta
ttacagtcttttgctgcaagtgtaatctcatcggctggttctatgtgcaggcctgttctc
ctgtcagcaaaaccttcatctagtttcgtccagggaagttgtggacccaggctttgtatt
aaaggtttatggcatccatatgctattggaaataatgagaatggccaagtccccaatgac
attaatcttggtgaagacgctactgagcaacagccatgtgcattgctgttgactgggcca
aatatgggtggaaaatcaacactcttgcgtgcaacctgccttgtggtcatacttgctcag
ttgggctgttatgtgcctggtgaaaagtgcacactcagtcctgtggatgttatttttaca
cgacttggtgcaactgacaggatcatgtcaggtgaaagcaccttttttgttgaatgctcg
gaaacagcatcagttcttcgaaatgcaactcaagattctcttgtattgcttgacgagctt
ggtagagggacgagcacttttgatggatatgcaattgcctatgctgtactgcgccacctg
gtggaaaatgttcactgccggttgctctttgccactcattaccatcccttgacaaaagaa
ttcgcttctcatccacatgtgaacatgcaacacatggcctgcacttttgaccggaagatc
aacggcgaacaagaactggttttcctctaccgcctcgcatcaggatcttctcctgagagc
tatggcttgcaggttgctctcatggcagggattcccaaatcagttgttgaagcagcttca
actgctggtgaccgaatgaagcttatgattagtgaaaatttcaagtccagtgaactgaga
gctgaattctccactctccatgaagaatggctgaaatccatattatctctttcaagtagc
agcagagactgctgggatgaggatacctctgacacgatcttgtgcttgtggcatgaaatg
agaagcttatacaggtatgattgttttaataaattagcttga
DBGET
integrated database retrieval system
