Dendrobium catenatum: 110108313
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Entry
110108313 CDS
T05027
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
dct
Dendrobium catenatum
Pathway
dct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110108313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110108313
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110108313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_I
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
110108313
NCBI-ProteinID:
XP_028547662
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MLFSSDVYFVVIRERKDAHGRRPGDEDYDPRTLYLPQEFLKSLSGGQRQWWEFKSKHMDK
VLFFKMGKFYELFEMDAHIGARELDLQYMKGDQPHCGFPEKNFLMNLEKLAMKGYRVLVV
EQTETPEQLELRRKEMGTKDKVVKREICAVVTKGTLVEGEKLLTRPDASYLMSVTEKSQK
FDEHNTQGTVLGICVVDVSTSKFMLGQFEDNFERDCLCSILSELRPVEIIKPSKVLSTAT
ERVLKHNSRNPLVNDLVPSSEFWNAEKTILEIKKIYSPSKHSGKSGMMDDVDGVHNLGDY
PGLPCILLELDSAGQNGSFALSALGGCLFYLRQAFLDETLLKCAKFDALQCVGSLGRVQK
PYMILDAPALENLEILENRNGNPAGTLYAQLDNCVTAFGKRLLKSWLARPLYDPGSILAR
QDAVSGFKGVSLAYALEFRKMLSRLPDMERLLARHFASCEAFGRNASAVILYEDAARKKL
MEFLGVLRGSQLMVQACTSLASLLASTKSSIIHYLLTTGKGLPDVSKILKFFKDAFDWSE
AEQSGRIIPHEGCDSDYDAVCKTISEVESGLMEHLNDQRKLLGNSSINYVTVGKDTYLLE
VPENLMSAVPQNYELRSSKKGYFRYWTAEIKKYMSELSRAEEEKESKLQGILLRLMEQFS
EHHSKWRQLVSVIADLSISEQGFLM
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttcatctgatgtatattttgttgttattagagaacggaaggatgcacatgga
aggcgcccaggagatgaagactatgatccaagaaccctttacctgccgcaggagttcttg
aagagtttgtctggtggacagaggcaatggtgggagtttaagtcgaagcacatggacaaa
gttttgtttttcaagatgggaaagttctatgaattatttgaaatggatgcacatattgga
gccagagaacttgatcttcagtatatgaagggggaccaacctcactgcgggttccctgaa
aagaacttcttaatgaatttggaaaaattggccatgaagggatatcgggttctcgttgtg
gagcagactgaaacacctgagcagcttgaacttcgtcggaaagaaatgggcaccaaagat
aaggttgttaagcgagaaatttgtgctgttgtcactaagggaacacttgttgagggggag
aaattgttaacacgtccagatgcttcttacttgatgtcagtcactgaaaaaagccaaaaa
tttgatgagcacaatacgcaaggcacagtgcttggcatttgtgttgtggatgtttcaacc
agcaaattcatgttgggacagtttgaagataatttcgagagggactgcttatgttcaata
ttatcagaattgaggcctgttgagattataaagccttctaaggtgctcagtactgcaact
gaaagagttctcaagcacaatagtagaaatcctctagtgaatgatttggttccttcctca
gaattttggaatgctgaaaaaacaattttggaaatcaagaaaatttatagcccatcaaaa
cattctggaaaatcagggatgatggatgatgttgatggtgtacataacctgggagactat
cctggacttccttgcattttattagagcttgatagtgcagggcaaaatggaagctttgct
ctttctgctttgggagggtgcctcttttatctaaggcaagcttttctggatgaaactctg
ctcaagtgtgctaaatttgacgcacttcaatgcgtgggctctctcggacgagttcaaaag
ccatatatgatacttgatgctcctgctcttgagaaccttgagattctggagaacagaaat
ggaaaccctgcaggaacactatatgctcaattagataattgtgtgacggcatttggcaaa
aggttgcttaaaagctggcttgcaaggccactctatgaccctggctccatcctggctcgc
caggatgcagtttcaggtttcaagggtgttagtcttgcctatgcactggagtttcgtaaa
atgctgtcaagacttccagatatggagcgcctgcttgcacgccattttgctagctgtgag
gcttttggaagaaatgccagtgccgtaattctttatgaggatgctgcccggaaaaagctg
atggaatttttaggtgtcctgcggggttcccagttgatggttcaagcttgtacctctttg
gcatctctgctggctagcacaaagtccagtataatccattatttgttgacaactggaaaa
ggtctacctgatgtttctaaaatattgaagtttttcaaggatgcatttgattggtcagaa
gctgaacagtctgggcgcattataccccatgaagggtgtgatagtgattatgatgctgtc
tgtaaaaccataagtgaagttgaatctggtctgatggagcacctaaacgaccaacgcaag
ttactgggaaattcatcgattaattatgtcactgtggggaaagatacatatctactagaa
gttcctgagaatctgatgagtgcagttccacagaattatgagttgcgttcatcaaagaag
ggatattttagatactggacagcagaaattaagaagtatatgtcagaactttcacgagca
gaagaagaaaaagaatctaagctgcaggggattcttttgaggcttatggaacaattcagc
gagcatcatagcaaatggagacaattagtttccgttattgcagacctttccatatccgaa
caaggctttctgatgtaa
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