KEGG   Dickeya parazeae: Dd586_3907
Entry
Dd586_3907        CDS       T01138                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ddc  Dickeya parazeae
Pathway
ddc00250  Alanine, aspartate and glutamate metabolism
ddc00330  Arginine and proline metabolism
ddc01100  Metabolic pathways
ddc01110  Biosynthesis of secondary metabolites
Module
ddc_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ddc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Dd586_3907
   00330 Arginine and proline metabolism
    Dd586_3907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ddc03000]
    Dd586_3907
Enzymes [BR:ddc01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Dd586_3907
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Dd586_3907
Transcription factors [BR:ddc03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Dd586_3907
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: ACZ78737
UniProt: D2BYT0
LinkDB
Position
complement(4458716..4462693)
AA seq 1325 aa
MGTTTMGVKLDEATRERLKAAAQRIDRTPHWLIKQAIFSYLERLESGADTPEIPQPVGQD
PSEAAEIMPQSPQEETHQPFLDFAEQVLPQSVLRSAITAAYRRPETEMIPMLLEQARMPE
ALSHAASTLAARLAATLRQQKNSGGRAGMVQSLLQEFSLSSQEGVALMCLAEALLRIPDK
PTRDALIRDKISTGNWQSHVGRSTSLFVNAAAWGLLVTGKLVSTHNESHLSGALNRIIAK
SGEPLVRKGVDMAMRLMGEQFVTGETIAEALANARKLEARGFRYSYDMLGEAAMTGDDAT
AYLASYQQAIHAIGKAACGRGIYEGPGISIKLSALHPRYSRAQYERVMDELYPRLLSLTL
LARHYDIGINIDAEEADRLELSLDLLERLCFEPQLAGWNGIGFVIQAYQKRCPFVIDAII
DLARRSQRRLMVRLVKGAYWDSEIKRAQVDGLEGYPVYTRKLYTDISYLACARRLLAVPN
LIYPQFATHNAHTLSAIYHLAGNNYYPGQYEFQCLHGMGEPLYEQVVGKVADGKLNRPCR
IYAPVGTHETLLAYLVRRLLENGANTSFVNRIADPSVALETLVADPVREAEALAVRDGQV
GSPHPRIPLPRALYGNGRRNASGLDLSSEHRLASLSSALLSGAARPWQAQPILAVDSDVG
GEARPVVNPAEPRDVVGYVREALPQEVMLALEQAASAGDIWFATPATERAAILSRAADLL
ENQQQQLLGLLVREAGKTLANAVAEVREAVDFLRYYAALVRETFNNHDYRPLGPVVCISP
WNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVQILHEAGVPVGALQLLPGNGET
VGAALVRDERVRGVMFTGSTAVAAQLQRVLAGRLDPQGRTTPFIAETGGINAMIVDSSAL
TEQVVADVMTSAFDSAGQRCSALRLLCVQEDVAEKTLTMLRGAMAEYRMGNPERLSTDVG
PLIDADAKQRIGHHIHTMRAKGRPVFQSAWPNSRDEAEWEHGYFIAPTLIELESVEELQQ
EVFGPVLHVVRYSRHQLETLIRHINAAGYGLTLGLHTRIDETIARVMGLAKVGNLYVNRN
MVGAVVGVQPFGGEGLSGTGPKAGGPLYLHRLLSHRPDDAATQVFTHRDNERPADFTARQ
ALLVGLQALESWARQTQRNALVSCCQRYAGLTQSGTIRVLPGPTGERNTYTLLPREQVLC
VADNDDDALVQLAAVLAVGSRALWRETPERQALYRQLPEPVQARLAFCRDGITDGSRFEA
VIFHGDADQLRQLSEQLAQRDGTIVGVQGLSRGETGIVLERLLIERSLSINTAAAGGNAS
LMTIG
NT seq 3978 nt   +upstreamnt  +downstreamnt
atgggcaccaccaccatgggcgtcaagctcgatgaggccacgcgtgagcgtcttaaagcc
gcggcgcagcgcattgatcgcacgccgcactggctgattaaacaggccattttcagctat
ctcgaacgccttgaaagtggtgccgacacgcctgaaattcctcagccggtcgggcaagac
ccgagtgaggcggcagagattatgccgcaatcaccacaagaagaaacccaccagccgttt
ttggacttcgccgagcaggttttgccgcagtcggtactacgttccgcgatcacggcggcg
taccgtcggccagaaacagagatgataccgatgttgctggaacaagcccgtatgccagag
gcgctgtcgcacgctgccagcacgctggcggcaaggctggcggcgacgttgcgccagcag
aaaaacagcggcggccgggcgggtatggtacagagcctgttgcaggaattttcgctgtca
tcgcaggagggcgtggcgttgatgtgtctggcggaggcgctgttgcgtattccggataaa
ccgactcgggacgcactgattcgcgacaaaatcagtaccggtaactggcagtcacacgtt
gggcgtagtacctcgttgttcgtcaatgccgcggcctgggggctactggtgaccggcaaa
ctggtatcgacccacaatgaatcccatctctccggtgcgttgaaccgtatcatcgccaaa
agcggtgagccgctggtgcgtaaaggcgtggacatggcgatgcggttgatgggcgagcag
ttcgtcaccggggaaaccatcgccgaagcgctggcgaatgcccgcaagctggaggcgcga
ggcttccgctattcctatgacatgctgggcgaagcggcgatgaccggcgatgacgccacg
gcctatctggcatcttatcagcaggccattcacgcgattggtaaagccgcctgcgggcgt
ggtatttacgaagggccggggatttccatcaaactttcggcgttgcacccgcgctatagc
cgggcgcagtacgagcgcgtgatggacgagttgtatccgcgcctgctgtcgttaacgctg
ttggcccggcactacgatatcggcattaacattgatgccgaagaagcggacaggctggag
ctgtctctcgacctgctcgaacggttgtgttttgaacctcaactggcggggtggaacggc
atcggtttcgtgattcaggcttaccagaagcgttgtccctttgtgattgatgcgattatc
gacctggcgcgtcgtagccagcgacgactgatggtgcggctggtgaaaggcgcttattgg
gatagtgaaatcaagcgcgctcaggtggatgggctggaaggctacccggtctatacccgc
aagctgtacaccgatatctcctatctggcgtgtgcccgtcgtctgttggcggtgccgaac
ctgatttacccgcagtttgccacccacaacgcccatacgctcagcgccatctaccatctg
gcaggcaacaattactaccccggccaatatgaattccagtgcttgcacggcatgggagaa
ccgttgtatgagcaggtggtgggtaaggtggcggacggaaaactgaaccgtccatgccgg
atttacgccccggttggcacccatgaaacgctgctggcctatctggtgcgccgtttgctg
gaaaatggtgccaatacctcgtttgttaaccggattgccgacccgtcggtggcactggaa
acactggtggctgacccggtcagggaagctgaagcactggcggtgcgggatgggcaggtt
gggtcgccgcacccgcgtatcccgttgccacgagcgttgtatggcaatggacgacgcaac
gccagcgggctggatttatccagcgagcaccggctggcgtcgctatccagtgcgctgcta
agcggtgccgcccgaccctggcaggcacagccgatactggctgtcgacagcgatgtcggc
ggtgaggcccgaccggtcgttaacccagctgagccgcgtgatgtggtgggctatgtgcgt
gaggcgctgccccaggaggtcatgctggcgctggagcaggcggccagcgccggtgatatc
tggttcgctacgcctgccaccgaacgggcggctatcttgtcgcgggcggccgacctgctg
gaaaaccagcaacaacagctgttgggattgctggtacgggaggcgggcaaaacgctggcg
aatgcggtggcggaagtccgtgaagccgtggatttcttacgttattacgctgcattggtg
cgtgagacattcaacaatcatgattaccgcccactggggccggtggtgtgcatcagcccg
tggaatttcccgctcgctattttcaccgggcaggtggcagcggcgctggcggcgggtaac
agcgtactggctaaaccggcggagcagacgccgctgattgcggcacaggcggtgcagata
ctgcatgaggctggggtgccggtcggtgcgctgcaattgttgccggggaatggcgaaacc
gtgggcgcggcactggtgcgtgacgagcgggtacgcggggtcatgtttaccggttctact
gctgtcgccgctcagttacaacgcgtgttggctggacggctcgacccgcaagggcgtacc
acgccgttcatcgccgaaaccggcggtatcaacgcgatgattgttgattcgtcggcgctg
accgaacaggtggtggcggatgtgatgacgtcggcgtttgatagcgccggtcaacgttgt
tcggcgttgcggctgctgtgtgtgcaggaggacgtcgcggagaaaacgctgacgatgcta
cgcggggcgatggcggagtaccgcatggggaacccggaacggctttccaccgatgttggg
ccgttgatcgatgccgatgcgaagcagcggattggtcaccatattcacacgatgagggcc
aaagggcggccggtgtttcagtctgcctggccgaatagccgtgatgaggcggaatgggag
cacgggtatttcattgccccgacgctgattgagctggaaagtgtggaagaactgcaacag
gaggtgttcgggccggtgctgcatgtcgtgcgctattcccgtcatcaattggagacacta
attcgacacatcaacgcggccggttatggcctcacgctgggtctgcatacccgtattgat
gaaaccatcgcgcgggtgatggggctggcgaaggtgggcaatctgtatgtgaaccgcaat
atggtcggtgcggtggtcggtgtacagccgtttggcggtgagggattatccggtaccggg
cccaaagcgggcgggccgctttatctgcaccggttgctgtcgcatcgcccggatgatgcc
gcgacacaggtgtttacccatcgggacaacgagcgcccggccgatttcaccgcacgtcag
gcactgctggttggattgcaggcgctggaatcttgggcgcggcagacgcagcgtaacgca
ctggtgtcttgttgccagcgttatgccgggctgacgcagagtggcaccatccgggtgtta
cccggcccgaccggcgagcgtaatacctataccttgttgccgcgtgagcaggtgctgtgt
gtggcggataacgacgatgacgcgctggtgcaactggcagcggtgctggcggtgggcagc
cgggcgttgtggcgtgaaacgccggagcgacaggcattgtaccggcaactgcctgaaccg
gtacaggcacggctggcattctgccgtgatggcataacggacggcagccggtttgaggcg
gtgattttccacggtgatgccgaccagttgcgtcagcttagcgagcagttagcgcaacgc
gatgggacgattgtcggtgtgcaagggttgtcccgtggagagactggcattgtgctggaa
cggttgctgatcgaacgctcgctcagtattaacaccgctgccgcgggcggcaatgccagc
ctgatgacaattggttaa

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