Dictyostelium discoideum (cellular slime mold): DDB_G0277199
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Entry
DDB_G0277199 CDS
T00245
Symbol
rpc1
Name
(RefSeq) RNA polymerase III, largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DDB_G0277199 (rpc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0277199 (rpc1)
Enzymes [BR:
ddi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DDB_G0277199 (rpc1)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
DDB_G0277199 (rpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PFK
E6
Motif
Other DBs
NCBI-GeneID:
8620917
NCBI-ProteinID:
XP_642724
dictyBase:
DDB_G0277199
UniProt:
Q86AQ5
LinkDB
All DBs
Position
2:7733653..7738100
Genome browser
AA seq
1450 aa
AA seq
DB search
MIELLKEDDAPKKIGHIQFGLLSEDDIVRLSHVQIVNRELFDLVKRKPTPYGVLDNKLGT
SDKQAMCTTCGLSIVDCVGHFGYIKLQLPVFHIGYLKNIMNILQMICKSCSTILLNEEKK
QYYLRKMRNKKMDNLQRKSLLKKIFLECRKTKECLKCGSTNGMIKKSGAFKIIHEKYKGK
TESLQDYYALYDDAIKYNPEMKSHIKKAQDDLNPLVALNLFKKISYQDIEIMNMDPVIGR
PERLILTYMLVPPVSIRPSVPMDGGSGTNEDDLTMKLSEILHINEHIRSNVDRAEMSAIM
EDWDYLQASCAIYINSDVPGLPLQMKPTKAVRGLSQRLKGKTGRFRGNLSGKRVDFSGRT
VISPDPNLNIDEVAVPQLIALTMTYPERVTDYNIERLQKYVINGPDRHPGANYIIYADGV
KKWLKFGNREKFAAELKIGDIVERHIIDGDIMLFNRQPSLHKLSIMSHKARVMPWRTLRF
NECVCTPYNADFDGDEMNIHLPQTEEARAEATILMGVTNNLITPRNGEPLVAATQDFLTA
SYLISRRDAFYERYRFALMCTHFADANEHIDLPPPAILKPVELWTGKQIFEVLLRPSVKS
HVLCNFETRSRTYSKNLYMCPKDGYVYFRNSELMCGSIDKSIIGGGNKNSLFHILMRDFS
PTIAANCMTRLAKLCARFLGDQGFSIGIPDIKPAEDLDRKKREIIETAYKKCAVFLKDYE
SGSLQLSSGCSMEQTFEAKMNQTLSQIRDDCGKLCVNDLPNYNSPLIMGLCGSKGSNINI
AQMICCVGQQIVNGTRIPNGFTNRTTPHFKHFAKNPKSKGFVSNSFYTGMIPTEFFFHTM
GGREGLVDTAVKTAETGYMQRRLMKALEDLSTHYDYTVRDSIGGIVQFIYGDDGLDPAGM
EAKDRPVDFLRAMMSVKSTRQCRNEPEMKPFEIRKLVESIIDSSKFEACTDLFKNEIRVF
FNGNEKTKGYIQELISLRKQFKLSSFDLNDNEDEIIIEDNSPMDISTTTTTTTTTTTNNA
VKITNITTDIEMNESNKEENDKIEKERIEKEKESKRLKLLGERFANEHVVNQIHRITKTQ
IELFLDICLDKYSRARIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI
KEIINAAKNISTPIITASLNCDYDIRSARIVAGRIEKTTLGHVATHIKEVVKRAGCYLSI
KIDKNFVDSLQLEINSKTISQSIASTKGLKLKPEQITTNGDYKLRIVPPANIREGSLYYL
QFLKNNLPAVIVKGIPTVNRVVISKVDEKQERYQLLVEGYDLRAVMATPGIKGTHTTSNH
IMECENTLGIETARNTIMSEIDMIMTSHGMSIDIRHVMLLADLMSFKGEILGITRFGIAK
MKESVLMLASFEKTTDHLFDAAVHHRQDDIVGVSECIIMGVVIPLGTGLFKLLRKSNKNN
LPKKSLLLQD
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttttaaaagaagatgacgctccaaagaaaattggtcatattcaatttggt
ttattatcagaagatgatatagttagattatcacatgttcaaattgttaatagagaatta
tttgatttagtaaagagaaaaccaacaccatatggtgtattagataataaattgggtaca
agcgataaacaagcaatgtgtacaacatgtggattaagtattgtcgattgtgttggtcat
tttggatatattaaattacaattaccagtttttcatattggatatttaaagaatattatg
aacattttacaaatgatttgcaagagttgttcaaccattctattgaatgaagagaagaaa
caatattatctaagaaagatgagaaataaaaagatggataatctacaaaggaagtcatta
ttgaaaaagatatttttagagtgtagaaaaaccaaagaatgtttgaaatgcggttcaacc
aatggtatgattaaaaagagtggtgcattcaagatcattcatgaaaagtataaaggaaag
acagagtcattgcaagactattacgcattgtatgatgacgccattaaatacaatccagag
atgaaatcacatataaagaaagcacaagacgatttgaacccattggtggccttgaacttg
tttaaaaagatctcttatcaagatattgaaattatgaatatggatccagtgattggtaga
cctgaaagattgatcctaacctatatgttggtgccaccggtatcaattcgtccatcggta
ccaatggatggtggtagtggcaccaatgaggatgatttgacaatgaaactatcagagata
ttgcatatcaatgaacatattagatccaatgtggatagagcagagatgtctgcaattatg
gaggattgggattatttacaagcatcatgtgcaatctatatcaattcagatgttccaggt
ttaccattacaaatgaaaccaaccaaagcagtacgtggtttatcacaacgtctcaagggt
aagacaggcagatttcgtggtaatctatcgggtaaacgtgttgatttctctggtcgtact
gtaatttcacccgatccaaatttaaatatcgatgaggttgcagtaccacaattgattgca
ttgacaatgacttatcctgaacgtgtaaccgattataatattgaacgtcttcaaaagtat
gttatcaatggtccagatcgtcatccaggtgcaaactatatcatctatgccgatggtgta
aagaaatggttgaaatttggtaatcgtgaaaagtttgcagcagaattgaaaattggtgat
atcgtggaacgtcatattatcgatggtgatatcatgttgttcaatcgtcaaccttcactt
cataaactttcgattatgtctcacaaagcaagagttatgccatggagaacacttcgtttc
aatgaatgcgtttgtacaccttacaatgcagatttcgatggtgatgaaatgaatattcat
ttaccacaaacagaggaagccagagcagaggcaaccattctcatgggtgtcactaacaat
ttgatcactccaagaaatggtgaaccattggttgcagcaactcaagattttcttactgct
tcctatttgatttcacgtcgtgatgctttctatgaaagataccgtttcgctctaatgtgt
actcactttgcagatgcaaatgaacatatcgatttaccaccacctgccattttgaaacca
gttgaactttggacaggtaaacaaattttcgaagtactcttacgtccatcggtcaaatca
catgttttatgcaattttgaaactcgttcacgtacctattcaaagaatctctatatgtgt
ccaaaggatggttatgtttattttagaaattccgaattaatgtgtggttcaatcgataaa
tcaatcattggtggtggtaataagaattcattgtttcatattctcatgagagatttctca
ccaaccatagctgccaattgtatgacacgtttagcaaaactttgtgctcgtttccttggt
gatcaaggtttttcaattggtatacccgatattaaaccagccgaagatttagatagaaag
aaacgtgaaatcattgaaactgcctacaagaaatgtgcagtattcttaaaggattatgaa
agtggtagtttacaattaagtagtggttgctcgatggaacaaacatttgaggcgaaaatg
aatcaaactctatcacaaattcgtgatgattgtggtaagctttgtgttaatgatttacca
aattacaattcaccattgattatgggtctatgtggttcaaaaggttcaaacattaatatt
gctcaaatgatctgttgtgtaggtcaacagattgtcaatggtactcgtattccaaatggt
ttcaccaatagaactacaccacatttcaaacattttgcaaagaatccaaaatcaaaaggt
ttcgtttcaaatagtttctatactggtatgattccaacagaattcttttttcacactatg
ggtggtagagagggtttggtagatactgctgtaaaaactgctgaaactggttatatgcaa
cgtcgtctaatgaaagctttagaggatctttcaactcattatgattatactgtacgtgat
tcaattggtggtattgttcaattcatttatggtgatgatggtttagatccagcaggtatg
gaagcaaaagatagacctgtagatttcctccgtgcaatgatgagtgttaaatcaactcgt
caatgtagaaatgaaccagaaatgaaaccatttgaaattcgtaaactcgttgaatccatt
attgacagctctaaatttgaagcttgtacagatttattcaaaaatgaaattagagttttc
tttaatggtaatgaaaaaacaaaaggttatattcaagaattaattagtttacgtaaacaa
tttaaattatcatcttttgatttaaatgataatgaagatgaaattattattgaagataat
tctccaatggatattagtactactactactactaccaccaccaccactacaaataatgca
gttaaaataactaatatcaccacagatattgaaatgaatgaaagtaataaagaagaaaat
gataaaattgaaaaagaaagaattgaaaaagaaaaagaatcaaaaagattaaaattatta
ggtgaacgttttgcaaatgaacatgttgtaaatcaaattcatagaattactaaaactcaa
atcgaattatttttagatatttgtttagataagtacagtagagctagaattgaaccaggt
acagcagttggtgcaattggtgctcaatcaattggtgaaccaggtactcagatgactttg
aaaactttccattttgctggtgtagcttctatgaatgtaacattgggtgtacctagaatt
aaagagattatcaatgccgctaaaaacatttcaactccgatcattaccgcaagtttaaat
tgtgactatgatattagatctgcaagaattgtagctggtcgtattgaaaagactacattg
ggtcatgttgcaacacacattaaagaggtggtaaaaagagcaggttgttatctttcaatt
aaaatcgataaaaactttgtagattcattacaattggaaatcaattcaaaaactatcagt
caatcaattgcctccaccaaaggtttgaaattaaaacccgaacaaatcactaccaatggt
gattacaaacttagaatcgtacctccagccaatatcagagagggttctttatattattta
caattcttaaagaataatttaccagcagtaattgttaaaggtattccaacggtcaatcgt
gttgtcatttcaaaggttgatgaaaaacaagaacgttatcaacttttggtcgaaggttat
gatttacgtgctgtaatggctacacctggtatcaaaggtactcatacaactagtaatcat
attatggaatgtgaaaatactttgggtattgaaacagctcgtaataccattatgtctgaa
atcgatatgattatgacaagtcatggtatgtccatcgatattcgtcatgttatgttattg
gctgatctcatgtctttcaagggtgaaatcttgggtatcactcgtttcggtatcgctaaa
atgaaggaatccgtacttatgttggctagttttgaaaagactaccgatcatcttttcgat
gctgccgtacatcaccgtcaagatgatatcgttggtgtttctgaatgtatcattatgggt
gttgttattcctttgggtacaggtttattcaaattactccgtaaatcaaataaaaataat
ttaccaaagaaatctttactcttacaagattaa
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