Dictyostelium discoideum (cellular slime mold): DDB_G0286621
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Entry
DDB_G0286621 CDS
T00245
Symbol
BRIP1
Name
(RefSeq) DEAD/DEAH box helicase
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDB_G0286621 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0286621 (BRIP1)
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DDB_G0286621 (BRIP1)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
DDB_G0286621 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
DDB_G0286621 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Kinesin_assoc
ResIII
Motif
Other DBs
NCBI-GeneID:
8625714
NCBI-ProteinID:
XP_637574
dictyBase:
DDB_G0286621
UniProt:
Q54LI7
LinkDB
All DBs
Position
4:4729555..4732791
Genome browser
AA seq
1078 aa
AA seq
DB search
MSSNNNNPPPKKVFSLSLLKPSPRVSGSSLPSSQSSQSSQSSQHSQSSQPPPSILSFFKA
KPITSSSQSSQTPATTTTTTTTTTTTTKTSTTIGVKRPISDIMDSGDDFNYLENEPDDYY
NTPFDYFNNSNINNNNNINNNNNNSVNKNTNTNSNINTNINGSIINNNNNKINVKDDASY
EKYEELGNGVYKIGNYKVKFPFKPYACQASMMSRILEGLDSKENCILESPTGTGKTLSLL
CSSLAWQEENKKKNQRDLEEKRKLALDSKQRMIEKKQLIDAAAAASAASNTTSNLPSITS
TSTSNSTSTSTSTSPIKQEATATTATTNSISPIKQETTKTTTTMTTTPSTSPIKSEELNL
DSYKYEKGLQCDYNGTGVGKFEPKKIPKIINKKPKYGSMTTTTTIQNNELIDYDNDGTQK
FIKKKSPTIFFCSRTHSQIKQLTGELKKTPYRPNMVVLASRDQYCINPLLKDVPKKLEKC
KKLLLDHGCRFKKTEQQTSLAKSSDFLGGGKKEVWDIEDLMEAGQAHSECPYFASRDMIE
KADLIFCPYNYLIDPQIRKSFADKVAGSIVIFDEAHNIEDALMETSSFDSSLEELNEHCY
QNFKDCIMNSRTMSMLSNEKALAIHYCYKLLESIIAWINKKVQTLKPIDFEKHQNVWKGE
KILNIFEEFGLNETNYFSFRDHLATLFDEGDGTSDNGKEGGGGSLSFPSKGKGGIGVGSN
KQKIDPVPQRALVLLESFEKVTAMIYQNKGWIEDYRLVLQKASAFQTNGGKKSNQGTKWN
YQFGIWAMSPRIAFSSLVQATRSVVLTSGTLSPLYSFPMELAAKFPISAEMGNLPDIAQR
AWIGTLSHGVKGTKLICTHGPSEGLDFQDSLGETILQHIELIPSGVLCFFPSYGFLEKLL
SRWDETGILKKINAKKRYFYEPKNQREFIETLDNYREEIKQRPNKGAILFAVCRGKVSEG
IDFSDEYARGVIVVGIPYPSLVDLRIVLKKEHNDTNKKGISGGDWYKLQAYRALNQALGR
CIRHKNDYGSILLIDERFTQMGNWNSLSKWTRSCIKNNRNLNTSLSSLKLFYDSKNKQ
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaataataataatccaccaccaaaaaaagtgttttcgcttagtttgttaaaa
ccttctcctagagttagtggatcatcattaccttcatcacaatcatcacaatcttcacaa
tcatcacaacattcacaatcatcacaaccgccaccatcaattctttcatttttcaaagca
aaaccaattacatcttcatcacaatcgtcacaaacaccagcaaccactacaacaaccact
acaacaacaacaacaacaacaaaaacatcaactacaatcggagtaaaaagaccaatatcg
gatattatggatagtggagatgatttcaattatttagagaatgaacctgatgattactat
aatacaccattcgattattttaataattcaaatataaataataataataatataaataat
aataacaataatagtgtaaataaaaatacaaatactaatagtaatattaataccaatata
aatggaagtattattaataataataataataaaattaatgttaaagatgatgcttcatat
gaaaaatatgaagaattaggaaatggtgtatacaaaattggtaattataaagttaaattc
ccattcaaaccatatgcatgtcaagcatcaatgatgtctagaattttagaaggtttagat
agtaaagagaattgtatattagaatcaccaactggcactggtaaaactttatctctacta
tgttcatcattagcatggcaagaagaaaataaaaaaaaaaatcaaagagatttagaagaa
aaaagaaaattagctttagattcaaaacaaagaatgattgaaaaaaagcaattaattgat
gctgccgctgctgcttctgctgcttccaatactacttcaaatttaccatctataacttca
acttcaacttctaattcaacttcaacttcaacttccacgtcaccaataaaacaagaagca
actgcaaccacagctacaacaaattcaatttcaccaataaaacaagagacaacaaaaaca
acaacaacaatgacaacgacaccatcaacatcaccaattaaaagtgaagaattaaattta
gattcatataaatatgaaaaaggtttacaatgtgattataatggtacaggagttggtaaa
tttgaaccaaagaaaataccaaaaataataaataaaaaaccaaaatatggatcaatgaca
accacaacgacaatacaaaataatgaattaattgattatgataatgatggtacacaaaaa
tttataaaaaagaaatctccaactatattcttttgttcaagaactcattcacaaattaaa
caattaacaggtgaattaaaaaagacaccctatagaccaaatatggttgtattagcatca
cgtgatcaatattgtattaatccattattaaaggatgtaccaaagaaacttgaaaaatgt
aaaaaactattattagatcatggttgtcgttttaaaaaaactgaacaacaaacatcattg
gcaaaatcatcagactttttagggggtggtaaaaaagaagtttgggatattgaagattta
atggaagcaggtcaagcacacagtgaatgtccttatttcgcatcaagagatatgattgaa
aaagcagatttaatattttgtccttataattacttaattgatccacaaatccgaaaaagt
tttgcagataaagttgcaggttcaattgtaatctttgatgaagctcataatattgaagat
gccttaatggagacgagtagtttcgattcatcattagaggaattgaatgaacattgttat
cagaattttaaagattgtataatgaattcaagaactatgagtatgctatccaatgaaaaa
gcattagccattcattattgttataaactattggaatcaattatcgcttggattaataaa
aaagttcaaactttaaaaccaatagattttgaaaaacatcaaaacgtttggaaaggtgaa
aagattttaaatatttttgaagagtttggtttaaatgaaacaaattatttcagctttcgt
gatcatcttgcaacattatttgatgaaggtgatggtacttctgataatggtaaagaaggt
ggtggtggttcactttcatttccatcaaaaggtaaaggtggtattggtgttggtagtaat
aaacaaaaaattgatccagtaccacaaagagcattagtattattagaatcatttgaaaaa
gttacagcaatgatttatcaaaacaaaggttggattgaagattatagattggttttacaa
aaagcatcagcatttcaaacaaatggtggtaagaaaagtaatcaaggtacaaaatggaat
tatcaatttggtatttgggcaatgagtccaagaattgcattttcatcattggttcaagca
actcgttctgttgtattaacatctggtacattatcaccattgtattcatttccaatggaa
ttggcagcgaaattcccaatttcagcagagatgggtaatttaccagatattgcacaacgt
gcttggattggtacattatcacatggagtaaagggtacaaaattaatttgtacacatggt
ccatcagagggattagattttcaagattcattaggtgaaactattttacaacatatcgaa
ttaataccgagcggtgtactttgtttctttccttcgtatggatttttagagaaattgtta
agtcgttgggatgaaactggtattctaaagaaaatcaatgcaaagaagagatatttttat
gaaccaaagaatcaaagagaattcattgaaaccctagataattatcgtgaagaaattaaa
caacgtccaaataaaggtgcaatcttattcgcagtttgtcgtggtaaagttagcgaaggt
attgatttcagtgatgaatatgctagaggtgttatagtcgttggtatcccctatccatct
ttagtagatcttcgtatcgttttaaagaaagaacataacgatacaaataaaaaaggtata
agtggtggcgattggtataaattacaagcttatcgtgccttaaatcaagctctaggtaga
tgtattagacacaaaaatgattatggttccattttattaatagatgaaagattcacccaa
atgggtaattggaattcactttcaaaatggacacgttcatgtataaaaaataatagaaat
ttaaatacctcactttcatctttaaaattattttatgattcaaaaaataaacaataa
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