Dictyostelium discoideum (cellular slime mold): DDB_G0293560
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Entry
DDB_G0293560 CDS
T00245
Symbol
rpa2
Name
(RefSeq) RNA polymerase I, second largest subunit
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DDB_G0293560 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0293560 (rpa2)
Enzymes [BR:
ddi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DDB_G0293560 (rpa2)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
DDB_G0293560 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
8629292
NCBI-ProteinID:
XP_629008
dictyBase:
DDB_G0293560
UniProt:
Q54BM1
LinkDB
All DBs
Position
6:complement(3044865..3048492)
Genome browser
AA seq
1130 aa
AA seq
DB search
MSEELKSLIQPHIDSFDFFTDHGIDLVLKDSEPLYFEHNSTQYKIRFTDLKLSRPTRNIV
EKEIKLYPNESRETGTTYNAPFKGAIGLYEVNEMDEMDDGTEVDYNKQEPTHTFEVDLGR
LPIMVKSRYCHLNGMSPEKLIESREEELEQGGYFIVNGNEKVVRMLVMTKANHPVALHRK
AWTNRGPGYTKNGITIRCVRPDRSSITNNLHYINDGQTTLRFLYRRQEFFLPATLLLKAL
KDTTEKEIYENIVQGDNENTFLTDRVELSLREQKINNINTQEEVLDYIGSRFRARTQFPP
SFSNIKIGRWFINQFVFVHLPNYNDKYNLLILMIQKLYAMVGGKCGTDNIDSPAFQEVLL
AGHIYGMILKEKLTEYLESTKSFVLKSFEDKKKSGDKLPDALKKVLDKNFKIADRFSYFL
ATGNLRSSSGIDLQQTSGFCVIADKLNFLRFISHFRSIHRGAFFATMKTTAIRKLMPESW
GFFCPVHTPDGAPCGLLNHLSSNCLVTVDAAQDPTVQKAQTLLPSFLAAHGMLPIDMVSV
YQHQYLTITLDGRVLGKIEPKAGEEMVKMLRYLRSMGNEPSIPKTMEISYAPPTNVENGQ
YSGISLFTTGARFMRPVVNLTSGQNELIGPQEQLYMEIAVVPHEVIKGVTTHIETSPTAM
FSLLANLTPFSDYNQSPRNMYQCQMAKQTMGTPLHSYPFRTDNKLYKVQNVQKPIVHTKN
QFKFRCNDYPHGCNAVIAVISNTGYDMEDAMIINKSAYERGFGHGSVYKNEYIDLDQGLS
RFEQKKTFFGRPNTVVDELDKFIDTDGLPFVGRLIKPGEPYYTYIRPSDGRQVTKDYKGK
EEAYIEDVRIIFGPNGATRDPSKINNICVKLRFNRNPVIGDKFSSRHGQKGVLSQLWPEI
NMPFTESGMKPDVIINPNAFPSRMTIGMLVEILAGKAGAIHGKFQDATAFQFDENNTAID
FFGEQLAKAGFNRFGNEQMYSGTTGKEFECEIFFGVCYYQRLRHMVKDKYQVRALGKVNA
LTRQPIKGRKVGGGIRFGEMERDSLLAHGASFCLNDRLMKSSDFAKIKVCKLCGSTLTIY
SKKDYSNQTVSECKSCKSSDSIATISIPYVFTYLVAELAAVNITMKLQVS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaattaaaatcattaatccaaccacacattgattcatttgatttttttaca
gatcatggtatagatttagtattaaaagatagtgaaccattatattttgaacataatagt
actcaatataaaatcagatttacagatttgaaactttcaagaccaacacgtaatattgtt
gaaaaagagattaaattatatccaaatgaatcaagagaaaccggtacaacttataatgca
ccatttaaaggtgcaattggtttatatgaagttaatgaaatggatgagatggatgacggt
acagaggtagattataataaacaagagccaactcatacatttgaggttgatttaggtcgt
ttaccaattatggtgaagtcaagatattgtcacctcaatggcatgtcaccagagaaatta
attgaaagtagagaagaggaattggagcaaggtggttatttcattgtcaatggtaatgaa
aaggttgtacgtatgttggtcatgacaaaagcaaatcatccagttgcacttcacagaaaa
gcatggacaaacagaggtccaggttacactaaaaatggtattaccattcgttgtgttcgt
ccagatcgttcatcaattacaaacaatcttcattatatcaatgatggtcaaactacatta
cgtttcttatatcgtcgtcaagaattctttttacctgctactctcctcttaaaagcatta
aaagataccactgaaaaggaaatctatgaaaatatcgttcaaggtgataatgaaaatact
tttctcactgatcgtgttgaattatcacttcgtgaacaaaaaattaataatattaacact
caagaagaagttttagattatattggttcacgttttagagctcgtactcaattcccacct
tcattttcaaatattaaaattggtagatggtttattaatcaatttgtttttgttcattta
ccaaattataatgataaatataatttattaattttaatgattcaaaaattatatgcaatg
gttggtggtaaatgtggtacagataatattgattcaccagcattccaagaagttttatta
gctggtcatatttatggtatgattttaaaagagaaattaacagaatatttagaatctaca
aaatcatttgttttaaagagttttgaagataaaaagaaatctggtgataaattgccagat
gcacttaaaaaagtattagataaaaactttaaaatagctgatagatttagttatttctta
gcaactggtaatcttagatcaagttctggtattgatttacaacaaacatcaggtttttgt
gttattgcagataaattaaactttttaagatttatttcacattttagatcaattcataga
ggtgcattttttgcaacaatgaaaactacagcaattagaaagttgatgccagaaagttgg
ggctttttctgtccagtacatacaccagatggtgcaccatgtggtttattgaatcattta
tcatcaaattgtttggttacagttgatgcagcacaagatccaactgttcaaaaggcacaa
acattattaccatcatttttagcagcacatggtatgttaccaattgatatggttagtgtt
tatcaacatcaatatctcactattacattggatggtcgtgtattgggtaagattgaacca
aaagcaggtgaagagatggttaaaatgttacgttatcttcgttcaatgggtaatgaacca
tcaattccaaaaaccatggaaatttcatatgcaccaccaaccaacgttgaaaatggtcaa
tattcaggcatttcattgtttacaactggtgcacgtttcatgagaccagtagtcaatttg
acaagtggtcaaaatgaattgattggaccacaagaacaactatatatggagattgctgtt
gtaccacatgaagttatcaaaggtgttacaactcatattgaaacttcaccaactgctatg
ttttcattgttggcaaatcttacaccattctctgactacaatcaatcaccacgtaatatg
tatcaatgtcaaatggcaaaacaaactatgggtaccccattacattcctatccattccgt
accgataataaattatacaaggttcaaaatgtacaaaaaccaatcgtacacactaaaaat
caattcaaattccgttgtaatgattatccacacggttgtaatgctgttattgccgtaatt
tcaaatactggttacgatatggaagatgctatgattattaataaatccgcttatgaacgt
ggttttggtcatggttccgtttacaagaatgaatacatcgatttggatcaaggtttatca
cgttttgaacaaaagaaaacattttttggtcgtccaaatacagttgtagatgaattggat
aaatttattgataccgatggtcttccattcgttggtcgtttaattaaacctggtgaacca
tattatacctatattcgtccatccgatggtagacaagtcaccaaagattacaaaggtaaa
gaagaagcttatattgaagatgttcgtatcattttcggtccaaatggtgcaactcgtgat
ccatctaaaatcaataacatttgtgttaaattacgtttcaatcgtaatcctgtcattggt
gataaattttcctctcgtcatggtcaaaaaggtgttctttcccaattatggccagaaatt
aatatgccattcactgaaagtggtatgaaaccagatgtaattatcaatccaaatgctttc
ccatcacgtatgaccattggtatgttggtagagattttagccggtaaagctggtgcaatc
catggtaaattccaagatgccaccgctttccaattcgatgaaaacaatacagccatcgat
ttctttggtgaacaattggcaaaggcaggtttcaatcgttttggtaatgaacaaatgtat
agtggtaccactggtaaagaatttgaatgtgaaatctttttcggtgtttgttactatcaa
agattacgtcatatggttaaagataaatatcaagtacgtgctctcggtaaagttaatgct
ttaactcgtcaaccaattaaaggtcgtaaggttggtggtggtattcgtttcggtgagatg
gaacgtgattcccttttggctcatggtgctagtttctgtttgaatgatcgtctcatgaaa
tcctctgatttcgcaaagattaaagtttgtaaattatgtggtagtaccctcacaatctac
tctaaaaaagattattccaatcaaactgtttctgaatgtaaatcttgtaaatccagtgat
tcaatcgctacaatttcaattccttacgttttcacttatttagttgctgaacttgctgct
gttaatattactatgaaattacaagttagttaa
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