Dickeya dianthicola: DDI_4489
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Entry
DDI_4489 CDS
T05141
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00540
Lipopolysaccharide biosynthesis
ddq01100
Metabolic pathways
ddq01250
Biosynthesis of nucleotide sugars
Module
ddq_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DDI_4489
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ddq01005
]
DDI_4489
Enzymes [BR:
ddq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DDI_4489
Lipopolysaccharide biosynthesis proteins [BR:
ddq01005
]
Core region
DDI_4489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
NAD_binding_10
KR
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ATO35657
LinkDB
All DBs
Position
complement(4629199..4630131)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDDGYRDILVVDNLKDGTKFANLVDLDIADYMDKEDFIASI
VAGDDLGDIDVVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLERGIPFMYASSAATY
GGRTDNFVEDRQYEQPLNVYGYSKFLFDQYVREILPQTSSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGEKPKLFAGSENFKRDFVYVGDVAAVNLWFWQHEVSGIFNCGTGRA
ESFQAVADAVLDYHQKDGVEYIPFPEKLQGRYQAYTQADLTNLRDAGYNEPFKTVAEGVA
DYLVWLNRNA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggcggcgctggcttcatcggcagcaatatcgtgaaggcgctgaat
gatgacgggtaccgggatattctggtggtcgacaatcttaaagatggcaccaagttcgcc
aatctggtcgatctggacatcgctgactatatggataaggaagacttcatcgccagtatc
gttgccggtgacgatctgggcgatatcgacgttgttttccacgaaggcgcctgttcctcc
accaccgagtgggatggtaagtacatgatggataataactatcagtactccaaggacgtg
ttgcactactgcctggagcgcgggattccattcatgtatgcctcttccgccgcgacctac
ggcggccgcaccgacaacttcgtggaagaccgccagtatgagcagccgttgaacgtctac
ggctattccaaattcctgttcgaccagtatgtgcgtgaaattctgccgcagaccagctca
cagatttgcggctttcgctacttcaacgtctacggaccgcgcgaaggccacaaaggcagc
atggccagcgtggcattccacctgaataaccagatcaatcagggtgaaaaaccaaaactg
ttcgccggcagcgaaaacttcaaacgcgacttcgtctatgtcggcgacgtggcggcggtg
aacctgtggttctggcaacacgaagtttccggcatattcaactgcggtaccgggcgcgcc
gagtccttccaggccgtggcggatgccgtactggactaccaccagaaagacggcgtggag
tacatccccttcccggaaaaactgcaaggccgctatcaggcctacacgcaggcagacctc
accaacctgcgcgacgctggttacaacgagcccttcaaaaccgtagcggaaggggtcgcc
gactacctggtctggctgaaccgcaacgcctga
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