Candidatus Desulfobacillus denitrificans: DSYM_03350
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Entry
DSYM_03350 CDS
T07109
Name
(GenBank) TrpB-like pyridoxal phosphate-dependent enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00260
Glycine, serine and threonine metabolism
ddz00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ddz01100
Metabolic pathways
ddz01110
Biosynthesis of secondary metabolites
ddz01230
Biosynthesis of amino acids
Module
ddz_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSYM_03350
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
DSYM_03350
Enzymes [BR:
ddz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
DSYM_03350
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BBO19636
UniProt:
A0A809RTW3
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All DBs
Position
327498..328850
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AA seq
450 aa
AA seq
DB search
MSDVKILLNESDIPTHWYNVVADMPNPPLPPLAPDGNPVTPEQMLAIFPGPLLEQEMSGE
RWIPIPEPVREIYKQWRPTPMFRARRLEQMLGTPAKIYYKYEGVSPAGSHKVNTSVPQAF
FNKAVGITRLTTETGAGQWGSSIAFAGQMFGIEVRVYMVKVSYNQKPFRRSMMQTWGAEV
FASPTDMTNAGKTALAADPNNPGSLGLAISEAVEEAASRKDTNYSLGSVLNHVCLHQTVI
GLEAKKQFEKVGDYPDMVFACCGGGSNFAGTAFPFLADKAAGKKVRLVAAEPSSCPSLTK
GVYAYDFGDVSGYTPMMKMYTLGHDFMPPSIHAGGLRYHGDSPLVCQLYNEGLIEAVAVP
QIATFEAGVQFARAEGIIPAPESNHAIRACIDEALRCKQTGEKKTLFFNLSGHGHFDMAS
YDKYFAGELVDYEYPAEAVQEALKRLPKVA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgtgaagattttgctcaacgaatccgatattccgacccactggtacaacgtc
gttgccgacatgccgaatccgcccctgccgccgctggcgccggacggcaatccggtcacg
cccgaacagatgctggccatcttccccggcccgctgctcgagcaggagatgtccggcgag
cgctggatcccgattcccgagccggtgcgcgagatctacaagcaatggcgcccgacgccg
atgttccgcgcgcgccgcctcgagcagatgctcggcacgccggcgaagatctactacaag
tatgaaggcgtcagcccggccggctcgcacaaggtcaacacctccgtgccgcaggccttc
ttcaacaaggcggtcggcatcacccgcctgaccaccgagaccggcgccggccagtggggt
tcctcgatcgccttcgccggccagatgttcggcatcgaggtgcgcgtctatatggtgaag
gtgagctacaaccagaagcccttccgccgctcgatgatgcagacctggggcgcggaggtc
ttcgcctcgccgaccgacatgaccaacgccggcaagacggcgctggccgccgatccgaac
aaccccggctcgctcggcctggcgatctccgaggccgtcgaggaggccgcctcgcgcaag
gacaccaattacagcctcggctcggtgctcaaccacgtctgcctgcaccagacggtgatc
ggcctggaagccaagaagcagttcgagaaggtcggcgactatcccgacatggtgttcgcc
tgctgcggcggcggctccaacttcgccggcaccgccttccccttccttgccgacaaggcc
gccggcaagaaggtgcgcctggtggcggccgagccgagctcctgcccgagcctgaccaag
ggcgtctacgcctacgacttcggcgacgtctccggctacacgccgatgatgaagatgtac
accctcggccacgacttcatgccgccctcgatccatgccggcggcctgcgctaccacggc
gactcgccgctggtgtgccagctctacaacgagggcctgatcgaggcggtggcggtgccg
cagatcgccaccttcgaggccggcgtgcagttcgcccgcgccgaaggcatcatcccggcg
cccgagtcgaatcatgccatccgcgcctgcatcgacgaggcgctgcgctgcaagcagacc
ggcgagaagaagacgctgttcttcaacctgtccggccacggccacttcgacatggcctcc
tacgacaagtacttcgccggcgagctggtggactacgagtatccggccgaggccgtgcag
gaagcgctcaagcgcctgccgaaggtcgcctaa
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