Candidatus Desulfobacillus denitrificans: DSYM_13560
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Entry
DSYM_13560 CDS
T07109
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00362
Benzoate degradation
ddz00627
Aminobenzoate degradation
ddz01100
Metabolic pathways
ddz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DSYM_13560
00627 Aminobenzoate degradation
DSYM_13560
00624 Polycyclic aromatic hydrocarbon degradation
DSYM_13560
Enzymes [BR:
ddz01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
DSYM_13560
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Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
BBO20657
UniProt:
A0A809RWA1
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All DBs
Position
1352052..1352894
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AA seq
280 aa
AA seq
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MARITASVYSSHVPAIGVAVDQGRTGEPYWQKMFAGFEFSKQWMKDNTPDVVFLVYNDHA
TAFSLEIIPTFAIGCAAEFRPADEGWGPRPVPAVKGHPELAAHIAQSVIMDDFDLTIVNR
MDVDHGLTVPLSLMCGQPAAWPCPVIPFAVNVVQYPVPSGRRCFNLGRAIRKAVESYDAP
LKVQVWGTGGMSHQLQGPRAGLINREWDNAFLDRLIADPAGLAQVPHIEYVREAGSEGIE
LVMWLIARGAMSDNLPKVAHRFYHVPASNTAVGHLILENQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaatcaccgcgagcgtctattcctcacacgtgccggccatcggcgtggccgtc
gaccagggcaggaccggcgagccgtactggcagaaaatgttcgccggcttcgagttttcg
aagcaatggatgaaggacaacacgcccgacgtcgtcttcctggtctacaacgatcacgcc
acggccttcagcctggagatcatcccgaccttcgccatcggctgcgcggcggaattcagg
cccgccgacgaaggctggggcccgcgcccggtgccggcggtgaagggccatccggagctg
gccgcccacatcgcccagtcggtgatcatggacgacttcgacctcaccatcgtgaacagg
atggacgtcgaccacggcctcaccgtgccgctgtcgctgatgtgcgggcagcccgcggcg
tggccgtgcccggtgattcccttcgcggtgaacgtcgtgcaatacccggtgccttcgggc
cggcgctgcttcaatctggggcgcgccatccgcaaggcggtcgaatcctacgacgcgccc
ctcaaggtccaggtctggggcaccggcggcatgagccaccagctgcaggggccgcgcgcc
ggccttatcaaccgcgaatgggacaatgccttcctcgaccgtctcatcgccgatccggcg
ggcctcgcgcaggtgccgcacatcgagtacgtgcgcgaagccggctcggagggcatcgag
ctggtgatgtggctgatcgcccgcggcgcgatgtccgacaatctccccaaggtggcgcac
cgcttctatcatgtcccggcgagcaacaccgccgtgggccatctgatcctggagaaccaa
taa
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